RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 CPXM2Q8N436 756 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 TAS1R2Q8TE23 839 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 DNASE2BQ8WZ79 361 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 SIPA1Q96FS4 1042 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 TOE1Q96GM8 510 aaKnown RBP17.84■□□□□ 0.45
PNKP-210ENST00000597965 NUP58Q9BVL2 599 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 PCED1AQ9H1Q7 454 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 FSCN3Q9NQT6 498 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 OLA1Q9NTK5 396 aaKnown RBP17.84■□□□□ 0.45
PNKP-210ENST00000597965 WSB2Q9NYS7 404 aaPredicted RBP17.84■□□□□ 0.45
PNKP-210ENST00000597965 NUDT5Q9UKK9 219 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 KLK13Q9UKR3 277 aa17.84■□□□□ 0.45
PNKP-210ENST00000597965 APOBEC2Q9Y235 224 aaKnown RBP17.84■□□□□ 0.45
PNKP-210ENST00000597965 MDM4O15151 490 aa17.83■□□□□ 0.44
PNKP-210ENST00000597965 CER1O95813 267 aa17.83■□□□□ 0.44
PNKP-210ENST00000597965 EFEMP1Q12805 493 aa17.83■□□□□ 0.44
PNKP-210ENST00000597965 ADAM9Q13443 819 aa17.83■□□□□ 0.44
PNKP-210ENST00000597965 PPP1R26Q5T8A7 1209 aaPredicted RBP17.83■□□□□ 0.44
PNKP-210ENST00000597965 FYB2Q5VWT5 728 aa17.83■□□□□ 0.44
PNKP-210ENST00000597965 RAB44Q7Z6P3 723 aaPredicted RBP17.83■□□□□ 0.44
PNKP-210ENST00000597965 SCD5Q86SK9 330 aa17.83■□□□□ 0.44
PNKP-210ENST00000597965 TMPRSS6Q8IU80 811 aa17.83■□□□□ 0.44
PNKP-210ENST00000597965 NAXDQ8IW45 347 aa17.83■□□□□ 0.44
PNKP-210ENST00000597965 GUF1Q8N442 669 aaKnown RBP17.83■□□□□ 0.44
PNKP-210ENST00000597965 DDI1Q8WTU0 396 aa17.83■□□□□ 0.44
PNKP-210ENST00000597965 PLD4Q96BZ4 506 aa17.83■□□□□ 0.44
PNKP-210ENST00000597965 APOBEC3GQ9HC16 384 aaKnown RBP17.83■□□□□ 0.44
PNKP-210ENST00000597965 MARCH2Q9P0N8 246 aa17.83■□□□□ 0.44
PNKP-210ENST00000597965 CACNA1GO43497 2377 aa17.83■□□□□ 0.44
PNKP-210ENST00000597965 A0A1B0GVL5 298 aa17.82■□□□□ 0.44
PNKP-210ENST00000597965 WASH3PC4AMC7 463 aa17.82■□□□□ 0.44
PNKP-210ENST00000597965 GJB3O75712 270 aa17.82■□□□□ 0.44
PNKP-210ENST00000597965 KLKB1P03952 638 aa17.82■□□□□ 0.44
PNKP-210ENST00000597965 ZNF883P0CG24 379 aa17.82■□□□□ 0.44
PNKP-210ENST00000597965 SYKP43405 635 aa17.82■□□□□ 0.44
PNKP-210ENST00000597965 HARS2P49590 506 aaKnown RBP17.82■□□□□ 0.44
PNKP-210ENST00000597965 TPMTP51580 245 aa17.82■□□□□ 0.44
PNKP-210ENST00000597965 PPP3CAQ08209 521 aa17.82■□□□□ 0.44
PNKP-210ENST00000597965 GRIK2Q13002 908 aa17.82■□□□□ 0.44
PNKP-210ENST00000597965 FBXL13Q8NEE6 735 aa17.82■□□□□ 0.44
PNKP-210ENST00000597965 ADAMTS14Q8WXS8 1223 aa17.82■□□□□ 0.44
PNKP-210ENST00000597965 TMEM176AQ96HP8 235 aa17.82■□□□□ 0.44
PNKP-210ENST00000597965 ELOVL2Q9NXB9 296 aa17.82■□□□□ 0.44
PNKP-210ENST00000597965 BCAT2O15382 392 aaPredicted RBP17.81■□□□□ 0.44
PNKP-210ENST00000597965 SH3BP5O60239 455 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 IGLV3-19P01714 112 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 TRIM49P0CI25 452 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 TRIM49CP0CI26 452 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 IL12RB1P42701 662 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 YWHAGP61981 247 aaKnown RBP eCLIP17.81■□□□□ 0.44
PNKP-210ENST00000597965 KRT85P78386 507 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 PDE4CQ08493 712 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 GEN1Q17RS7 908 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 EDRF1Q3B7T1 1238 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 MPPE1Q53F39 396 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 ZNF394Q53GI3 561 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 DENND1CQ8IV53 801 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 CHCHD4Q8N4Q1 142 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 ANKRD52Q8NB46 1076 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 SPRYD3Q8NCJ5 442 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 PIWIL1Q96J94 861 aaKnown RBP17.81■□□□□ 0.44
PNKP-210ENST00000597965 SPATA32Q96LK8 384 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 GPR174Q9BXC1 333 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 CIPCQ9C0C6 399 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 MKRN2Q9H000 416 aaKnown RBP17.81■□□□□ 0.44
PNKP-210ENST00000597965 SLC6A17Q9H1V8 727 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 MMRN2Q9H8L6 949 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 FBRSQ9HAH7 460 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 AGO1Q9UL18 857 aaKnown RBP17.81■□□□□ 0.44
PNKP-210ENST00000597965 PLA2G4CQ9UP65 541 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 HPSEQ9Y251 543 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 WDFY3Q8IZQ1 3526 aa17.81■□□□□ 0.44
PNKP-210ENST00000597965 METTL12A8MUP2 240 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 EPHX1P07099 455 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 HMBSP08397 361 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 MAOBP27338 520 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 MXI1P50539 228 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 YWHAEP62258 255 aaKnown RBP17.8■□□□□ 0.44
PNKP-210ENST00000597965 ZNF234Q14588 700 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 RAB41Q5JT25 222 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 DCAF12L1Q5VU92 463 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 ARHGAP17Q68EM7 881 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 SERPINA13PQ6UXR4 307 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 GLRX5Q86SX6 157 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 PIGZQ86VD9 579 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 ZNF557Q8N988 423 aaPredicted RBP17.8■□□□□ 0.44
PNKP-210ENST00000597965 OR2I1PQ8NGU4 316 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 RNF139Q8WU17 664 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 ERLEC1Q96DZ1 483 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 MIR1-1HGQ9H1L0 117 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 CISHQ9NSE2 258 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 RAB20Q9NX57 234 aa17.8■□□□□ 0.44
PNKP-210ENST00000597965 ZZEF1O43149 2961 aa17.79■□□□□ 0.44
PNKP-210ENST00000597965 SLC12A8A0AV02 714 aa17.79■□□□□ 0.44
PNKP-210ENST00000597965 LATS1O95835 1130 aa17.79■□□□□ 0.44
PNKP-210ENST00000597965 ZBED1O96006 694 aa17.79■□□□□ 0.44
PNKP-210ENST00000597965 FTH1P19P0C7X4 201 aa17.79■□□□□ 0.44
PNKP-210ENST00000597965 EPB41P11171 864 aaKnown RBP17.79■□□□□ 0.44
PNKP-210ENST00000597965 MATKP42679 507 aa17.79■□□□□ 0.44
PNKP-210ENST00000597965 MCCD1P59942 119 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms