RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 CFAP57Q96MR6 1250 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 FAM83CQ9BQN1 747 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 THAP2Q9H0W7 228 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 TRPV5Q9NQA5 729 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 MYO1AQ9UBC5 1043 aa14.95□□□□□ -0.02
VRK3-213ENST00000597215 TICRRQ7Z2Z1 1910 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 CUL9Q8IWT3 2517 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 SYNJ2BP-COX16A0A087WUM0 186 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 SOWAHDA6NJG2 315 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 ARNTLO00327 626 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 SCAMP3O14828 347 aaKnown RBP14.94□□□□□ -0.02
VRK3-213ENST00000597215 DCXO43602 365 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 GREM1O60565 184 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 IPO7O95373 1038 aaKnown RBP14.94□□□□□ -0.02
VRK3-213ENST00000597215 NFATC1O95644 943 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 LATS1O95835 1130 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 F9P00740 461 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 APOEP02649 317 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 CYP1A2P05177 515 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 SLC2A3P11169 496 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 RPL7AP62424 266 aaKnown RBP14.94□□□□□ -0.02
VRK3-213ENST00000597215 DEUP1Q05D60 604 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 NME3Q13232 169 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 EIF4EBP2Q13542 120 aaPredicted RBP14.94□□□□□ -0.02
VRK3-213ENST00000597215 SPA17Q15506 151 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 EML3Q32P44 896 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 OTUD1Q5VV17 481 aaPredicted RBP14.94□□□□□ -0.02
VRK3-213ENST00000597215 SND1Q7KZF4 910 aaKnown RBP eCLIP14.94□□□□□ -0.02
VRK3-213ENST00000597215 BBS7Q8IWZ6 715 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 CPA6Q8N4T0 437 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 CSGALNACT1Q8TDX6 532 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 RNF34Q969K3 372 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 SLC39A13Q96H72 371 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 FCRL2Q96LA5 508 aaPredicted RBP14.94□□□□□ -0.02
VRK3-213ENST00000597215 TBCBQ99426 244 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 LUC7LQ9NQ29 371 aaKnown RBP14.94□□□□□ -0.02
VRK3-213ENST00000597215 COX16Q9P0S2 106 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 PAXBP1Q9Y5B6 917 aa14.94□□□□□ -0.02
VRK3-213ENST00000597215 EIF3CLB5ME19 914 aaKnown RBP14.93□□□□□ -0.02
VRK3-213ENST00000597215 NDUFA10O95299 355 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 LCA5LO95447 670 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 KLKB1P03952 638 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 TMEM253P0C7T8 217 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 ARSAP15289 507 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 TFE3P19532 575 aaPredicted RBP14.93□□□□□ -0.02
VRK3-213ENST00000597215 CCR1P32246 355 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 RDXP35241 583 aaKnown RBP14.93□□□□□ -0.02
VRK3-213ENST00000597215 SLC11A2P49281 568 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 ZNF143P52747 638 aaPredicted RBP14.93□□□□□ -0.02
VRK3-213ENST00000597215 ZXDAP98168 799 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 ATP11AP98196 1134 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 MTA1Q13330 715 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 RUNX3Q13761 415 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 PPP2R5DQ14738 602 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 CCDC14Q49A88 953 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 ZC3H12AQ5D1E8 599 aaKnown RBP14.93□□□□□ -0.02
VRK3-213ENST00000597215 TRIM68Q6AZZ1 485 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 STRADAQ7RTN6 431 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 TMEM139Q8IV31 216 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 DENND1CQ8IV53 801 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 CCDC112Q8NEF3 446 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 FNIP1Q8TF40 1166 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 EIF3CQ99613 913 aaKnown RBP14.93□□□□□ -0.02
VRK3-213ENST00000597215 CNPY3Q9BT09 278 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 PACSIN1Q9BY11 444 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 LINC00597Q9H2U6 94 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 EBF3Q9H4W6 596 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 HPS4Q9NQG7 708 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.93□□□□□ -0.02
VRK3-213ENST00000597215 SLC12A6Q9UHW9 1150 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 AGO1Q9UL18 857 aaKnown RBP14.93□□□□□ -0.02
VRK3-213ENST00000597215 INTUQ9ULD6 942 aa14.93□□□□□ -0.02
VRK3-213ENST00000597215 EPN1Q9Y6I3 576 aaPredicted RBP14.93□□□□□ -0.02
VRK3-213ENST00000597215 TTC28Q96AY4 2481 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 COL4A2P08572 1712 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 TMEM191CA6NGB0 347 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 ENDOD1O94919 500 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 MOCS2O96007 188 aaPredicted RBP14.92□□□□□ -0.02
VRK3-213ENST00000597215 ALADP13716 330 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 CHKAP35790 457 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 MAGEA1P43355 309 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 TNK2Q07912 1038 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 NR1H3Q13133 447 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 CDO1Q16878 200 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 C15orf59Q2T9L4 293 aaPredicted RBP14.92□□□□□ -0.02
VRK3-213ENST00000597215 ITPRIPL2Q3MIP1 535 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 BRMS1LQ5PSV4 323 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 BNIPLQ7Z465 357 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 ATP6V0D2Q8N8Y2 350 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 AZIN2Q96A70 460 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 ARHGEF26Q96DR7 871 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 BTN2A3PQ96KV6 586 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 NUP85Q9BW27 656 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 COL25A1Q9BXS0 654 aaPredicted RBP14.92□□□□□ -0.02
VRK3-213ENST00000597215 ADAM33Q9BZ11 813 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 PIGVQ9NUD9 493 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 CALCOCO1Q9P1Z2 691 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 UVRAGQ9P2Y5 699 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 WNT16Q9UBV4 365 aa14.92□□□□□ -0.02
VRK3-213ENST00000597215 FBXL21Q9UKT6 434 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms