RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 MIS12Q9H081 205 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 FANCLQ9NW38 375 aa13.62□□□□□ -0.23
USE1-207ENST00000596136 PRRT4C9JH25 899 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 E5RJQ4 531 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 SGK1O00141 431 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 KLF8O95600 359 aaPredicted RBP13.61□□□□□ -0.23
USE1-207ENST00000596136 RETP07949 1114 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 UCHL3P15374 230 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 DGKGP49619 791 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 PDCLQ13371 301 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 EIF4EBP2Q13542 120 aaPredicted RBP13.61□□□□□ -0.23
USE1-207ENST00000596136 DRAP1Q14919 205 aaPredicted RBP13.61□□□□□ -0.23
USE1-207ENST00000596136 KRT31Q15323 416 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 EOGTQ5NDL2 527 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 C10orf76Q5T2E6 689 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 ADGRF1Q5T601 910 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 NUGGCQ68CJ6 796 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 RNF43Q68DV7 783 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 TOGARAM2Q6ZUX3 1019 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 TRMT11Q7Z4G4 463 aaKnown RBP13.61□□□□□ -0.23
USE1-207ENST00000596136 SLC47A2Q86VL8 602 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 UNC45BQ8IWX7 931 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 CCDC33Q8N5R6 958 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 GPR161Q8N6U8 529 aaKnown RBP13.61□□□□□ -0.23
USE1-207ENST00000596136 TXNDC5Q8NBS9 432 aaKnown RBP13.61□□□□□ -0.23
USE1-207ENST00000596136 TSTD1Q8NFU3 115 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 GOLGA1Q92805 767 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 SLC39A13Q96H72 371 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 ZC3H10Q96K80 434 aaKnown RBP13.61□□□□□ -0.23
USE1-207ENST00000596136 TRIM62Q9BVG3 475 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 SLC2A11Q9BYW1 496 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 ST7Q9NRC1 585 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 PLK2Q9NYY3 685 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 TMEM63CQ9P1W3 806 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 NCDNQ9UBB6 729 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 RAB23Q9ULC3 237 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 FHOD1Q9Y613 1164 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 DCHS1Q96JQ0 3298 aa13.61□□□□□ -0.23
USE1-207ENST00000596136 MSI1O43347 362 aaKnown RBP13.6□□□□□ -0.23
USE1-207ENST00000596136 LRP3O75074 770 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 RPP40O75818 363 aaKnown RBP13.6□□□□□ -0.23
USE1-207ENST00000596136 CYBBP04839 570 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 GLI1P08151 1106 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 NCAM1P13591 858 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 ZNF18P17022 549 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 CDH5P33151 784 aaPredicted RBP13.6□□□□□ -0.23
USE1-207ENST00000596136 YWHAZP63104 245 aaKnown RBP13.6□□□□□ -0.23
USE1-207ENST00000596136 MYL5Q02045 173 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 NCAPHQ15003 741 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 MPPE1Q53F39 396 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 SYPL2Q5VXT5 272 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 CACNA2D4Q7Z3S7 1137 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 ZNF513Q8N8E2 541 aaPredicted RBP13.6□□□□□ -0.23
USE1-207ENST00000596136 OLIG1Q8TAK6 271 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 DQX1Q8TE96 717 aaKnown RBP13.6□□□□□ -0.23
USE1-207ENST00000596136 PIWIL1Q96J94 861 aaKnown RBP13.6□□□□□ -0.23
USE1-207ENST00000596136 LOXL4Q96JB6 756 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 CPXM1Q96SM3 734 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 STK33Q9BYT3 514 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 HSD3B7Q9H2F3 369 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 POPDC2Q9HBU9 364 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 CD248Q9HCU0 757 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 ASNSD1Q9NWL6 643 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 TAB2Q9NYJ8 693 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 LIMA1Q9UHB6 759 aaKnown RBP13.6□□□□□ -0.23
USE1-207ENST00000596136 NAALADL1Q9UQQ1 740 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 TLR6Q9Y2C9 796 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 DAAM1Q9Y4D1 1078 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 ABCA7Q8IZY2 2146 aa13.6□□□□□ -0.23
USE1-207ENST00000596136 IGLV3-25P01717 112 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 PNMA6AP0CW24 399 aaPredicted RBP13.59□□□□□ -0.23
USE1-207ENST00000596136 HOXD9P28356 352 aaPredicted RBP13.59□□□□□ -0.23
USE1-207ENST00000596136 NTSR1P30989 418 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 KRT9P35527 623 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 TBX4P57082 545 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 ENPP2Q13822 863 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 FAM133BQ5BKY9 247 aaKnown RBP13.59□□□□□ -0.23
USE1-207ENST00000596136 MPP7Q5T2T1 576 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 PRR23BQ6ZRT6 265 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 CEP68Q76N32 757 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 APTXQ7Z2E3 356 aaKnown RBP13.59□□□□□ -0.23
USE1-207ENST00000596136 FAM160A2Q8N612 972 aaPredicted RBP13.59□□□□□ -0.23
USE1-207ENST00000596136 MDGA1Q8NFP4 955 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 DDX1Q92499 740 aaKnown RBP13.59□□□□□ -0.23
USE1-207ENST00000596136 BHMTQ93088 406 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 FAM149B1Q96BN6 582 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 PPP1R13BQ96KQ4 1090 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 FCRL2Q96LA5 508 aaPredicted RBP13.59□□□□□ -0.23
USE1-207ENST00000596136 SERPINB11Q96P15 392 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 GABRG3Q99928 467 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 LSM14BQ9BX40 385 aaKnown RBP13.59□□□□□ -0.23
USE1-207ENST00000596136 VPS16Q9H269 839 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 GANQ9H2C0 597 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 POLMQ9NP87 494 aaPredicted RBP13.59□□□□□ -0.23
USE1-207ENST00000596136 TJP2Q9UDY2 1190 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 GMEB2Q9UKD1 530 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 CLEC4EQ9ULY5 219 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 SIK3Q9Y2K2 1263 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 RALGAPA1Q6GYQ0 2036 aa13.59□□□□□ -0.23
USE1-207ENST00000596136 A0A1W2PQF6 199 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms