RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 ITM2CQ9NQX7 267 aa12.88□□□□□ -0.35
SIN3B-204ENST00000594372 THAP10Q9P2Z0 257 aaPredicted RBP12.88□□□□□ -0.35
SIN3B-204ENST00000594372 APOBEC2Q9Y235 224 aaKnown RBP12.88□□□□□ -0.35
SIN3B-204ENST00000594372 SNX11Q9Y5W9 270 aa12.88□□□□□ -0.35
SIN3B-204ENST00000594372 UBE4BO95155 1302 aa12.88□□□□□ -0.35
SIN3B-204ENST00000594372 CBX4O00257 560 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 HLA-DRAP01903 254 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 EPHX1P07099 455 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 PDCP20941 246 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 PIK3CAP42336 1068 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 HNRNPDQ14103 355 aaKnown RBP12.87□□□□□ -0.35
SIN3B-204ENST00000594372 KNOP1Q1ED39 458 aaKnown RBP12.87□□□□□ -0.35
SIN3B-204ENST00000594372 ZNF394Q53GI3 561 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 DENND1CQ8IV53 801 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 KIAA0895Q8NCT3 520 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 BAHD1Q8TBE0 780 aaPredicted RBP12.87□□□□□ -0.35
SIN3B-204ENST00000594372 CYFIP2Q96F07 1278 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 DUSP9Q99956 384 aaKnown RBP12.87□□□□□ -0.35
SIN3B-204ENST00000594372 MTG2Q9H4K7 406 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 COMMD8Q9NX08 183 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 DNMT3LQ9UJW3 386 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 FBXO10Q9UK96 956 aa12.87□□□□□ -0.35
SIN3B-204ENST00000594372 TRABD2BA6NFA1 517 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 METTL12A8MUP2 240 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 SYNCRIPO60506 623 aaKnown RBP12.86□□□□□ -0.35
SIN3B-204ENST00000594372 PENKP01210 267 aaPredicted RBP12.86□□□□□ -0.35
SIN3B-204ENST00000594372 ACSL1P33121 698 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 PLA2G4AP47712 749 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 GOLGA8FQ08AF8 430 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 GOLGA8DPQ0D2H9 430 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 STK4Q13043 487 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 BMT2Q1RMZ1 405 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 PRAMEF14Q5SWL7 426 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 PPP1R26Q5T8A7 1209 aaPredicted RBP12.86□□□□□ -0.35
SIN3B-204ENST00000594372 CEP135Q66GS9 1140 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 SV2AQ7L0J3 742 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 C12orf56Q8IXR9 622 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 CRYBG2Q8N1P7 616 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 C1orf216Q8TAB5 229 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 PRCCQ92733 491 aaPredicted RBP12.86□□□□□ -0.35
SIN3B-204ENST00000594372 PIWIL1Q96J94 861 aaKnown RBP12.86□□□□□ -0.35
SIN3B-204ENST00000594372 AGO1Q9UL18 857 aaKnown RBP12.86□□□□□ -0.35
SIN3B-204ENST00000594372 KALRNO60229 2985 aa12.86□□□□□ -0.35
SIN3B-204ENST00000594372 GFRA2O00451 464 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 STX6O43752 255 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 KLRC4O43908 158 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 CER1O95813 267 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 ASS1P00966 412 aaKnown RBP12.85□□□□□ -0.35
SIN3B-204ENST00000594372 ACADMP11310 421 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 KIF11P52732 1056 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 CLDN10P78369 228 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 ZACNQ401N2 412 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 DHRS13Q6UX07 377 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 TMPRSS7Q7RTY8 843 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 ANKS1BQ7Z6G8 1248 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 GLRX5Q86SX6 157 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 ZC3H3Q8IXZ2 948 aaKnown RBP12.85□□□□□ -0.35
SIN3B-204ENST00000594372 IQUBQ8NA54 791 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 RBBP8NLQ8NC74 664 aaPredicted RBP12.85□□□□□ -0.35
SIN3B-204ENST00000594372 PIP4K2CQ8TBX8 421 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 TAS1R2Q8TE23 839 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 HNRNPABQ99729 332 aaKnown RBP12.85□□□□□ -0.35
SIN3B-204ENST00000594372 ARID3AQ99856 593 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 LRRC27Q9C0I9 530 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 ELOVL2Q9NXB9 296 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 SERTAD1Q9UHV2 236 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 CFAP46Q8IYW2 2715 aa12.85□□□□□ -0.35
SIN3B-204ENST00000594372 SLC12A8A0AV02 714 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 H0Y8X5 98 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 TULP2O00295 520 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 CUTAO60888 179 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 FSBPO95073 299 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 NR3C1P04150 777 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 ITPKBP27987 946 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 GCLMP48507 274 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 NUMBP49757 651 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 SGSHP51688 502 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 AMPD3Q01432 767 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 ENPP2Q13822 863 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 SGSM1Q2NKQ1 1148 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 FNDC3BQ53EP0 1204 aaKnown RBP12.84□□□□□ -0.35
SIN3B-204ENST00000594372 CNNM4Q6P4Q7 775 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 SERPINA13PQ6UXR4 307 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 DDI1Q8WTU0 396 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 ZDHHC5Q9C0B5 715 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 LHX5Q9H2C1 402 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 CUEDC2Q9H467 287 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 UPF2Q9HAU5 1272 aaKnown RBP12.84□□□□□ -0.35
SIN3B-204ENST00000594372 TM9SF3Q9HD45 589 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 DMAC2Q9NW81 257 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 SLC27A6Q9Y2P4 619 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 PCDHA5Q9Y5H7 936 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 MGAQ8IWI9 3026 aa12.84□□□□□ -0.35
SIN3B-204ENST00000594372 ZNF462Q96JM2 2506 aa12.83□□□□□ -0.36
SIN3B-204ENST00000594372 PLK4O00444 970 aa12.83□□□□□ -0.36
SIN3B-204ENST00000594372 P4HA1P13674 534 aa12.83□□□□□ -0.36
SIN3B-204ENST00000594372 PPP3CAQ08209 521 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms