RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ATP8B1O43520 1251 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 CST8O60676 142 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 CSPG5O95196 566 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 RB1P06400 928 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 SPATA31D3P0C874 917 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 RARGP13631 454 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 AIF1P55008 147 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 SCAPQ12770 1279 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 TWF1Q12792 350 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 LILRA6Q6PI73 481 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 CCDC137Q6PK04 289 aaKnown RBP15.76■□□□□ 0.11
VRK3-207ENST00000594092 SPATA31D4Q6ZUB0 917 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 MRPL43Q8N983 215 aaKnown RBP15.76■□□□□ 0.11
VRK3-207ENST00000594092 FAF2Q96CS3 445 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 RNF157Q96PX1 679 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 ZNF670Q9BS34 389 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 UBE2OQ9C0C9 1292 aaKnown RBP15.76■□□□□ 0.11
VRK3-207ENST00000594092 RAB17Q9H0T7 212 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 WDCPQ9H6R7 721 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 TLR9Q9NR96 1032 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 PCDHA11Q9Y5I1 949 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 GBF1Q92538 1859 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 CHD7Q9P2D1 2997 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 RANBP2P49792 3224 aaKnown RBP15.75■□□□□ 0.11
VRK3-207ENST00000594092 ZSCAN5CA6NGD5 496 aaPredicted RBP15.75■□□□□ 0.11
VRK3-207ENST00000594092 MSI1O43347 362 aaKnown RBP15.75■□□□□ 0.11
VRK3-207ENST00000594092 ADH1AP07327 375 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 KCNJ1P48048 391 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 DYNLT1P63172 113 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 SNX1Q13596 522 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 CCNG2Q16589 344 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 ANKRD20A8PQ5CZ79 823 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 EFHC2Q5JST6 749 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 FAM118BQ9BPY3 351 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 EMILIN2Q9BXX0 1053 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 MAK16Q9BXY0 300 aaKnown RBP15.75■□□□□ 0.11
VRK3-207ENST00000594092 YBX2Q9Y2T7 364 aaKnown RBP15.75■□□□□ 0.11
VRK3-207ENST00000594092 CHD9Q3L8U1 2897 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 ESYT3A0FGR9 886 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 GRM6O15303 877 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 MYBL2P10244 700 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 PTGIRP43119 386 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 CAMK1Q14012 370 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 TFDP2Q14188 446 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 VEPH1Q14D04 833 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 ARL13BQ3SXY8 428 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 GSPT2Q8IYD1 628 aaKnown RBP15.75■□□□□ 0.11
VRK3-207ENST00000594092 CCDC105Q8IYK2 499 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 PQLC3Q8N755 202 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 PCDH19Q8TAB3 1148 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 CASKIN2Q8WXE0 1202 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 IFT81Q8WYA0 676 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 OVCA2Q8WZ82 227 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 RNF34Q969K3 372 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 HAUS1Q96CS2 278 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 MYRFLQ96LU7 910 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 SERPINB11Q96P15 392 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 TGS1Q96RS0 853 aaKnown RBP15.75■□□□□ 0.11
VRK3-207ENST00000594092 TKTL2Q9H0I9 626 aa15.75■□□□□ 0.11
VRK3-207ENST00000594092 OLA1Q9NTK5 396 aaKnown RBP15.75■□□□□ 0.11
VRK3-207ENST00000594092 TBX18O95935 607 aa15.74■□□□□ 0.11
VRK3-207ENST00000594092 KLRC2P26717 231 aa15.74■□□□□ 0.11
VRK3-207ENST00000594092 EPHB3P54753 998 aa15.74■□□□□ 0.11
VRK3-207ENST00000594092 EFEMP1Q12805 493 aa15.74■□□□□ 0.11
VRK3-207ENST00000594092 CUL1Q13616 776 aa15.74■□□□□ 0.11
VRK3-207ENST00000594092 TAF12Q16514 161 aa15.74■□□□□ 0.11
VRK3-207ENST00000594092 KCTD19Q17RG1 926 aaPredicted RBP15.74■□□□□ 0.11
VRK3-207ENST00000594092 HDXQ7Z353 690 aa15.74■□□□□ 0.11
VRK3-207ENST00000594092 JAMLQ86YT9 394 aa15.74■□□□□ 0.11
VRK3-207ENST00000594092 EIF1ADQ8N9N8 165 aaKnown RBP15.74■□□□□ 0.11
VRK3-207ENST00000594092 PDZD8Q8NEN9 1154 aa15.74■□□□□ 0.11
VRK3-207ENST00000594092 TRMT2BQ96GJ1 504 aaKnown RBP15.74■□□□□ 0.11
VRK3-207ENST00000594092 SAMD11Q96NU1 681 aa15.74■□□□□ 0.11
VRK3-207ENST00000594092 CSPG4P5Q96PW8 444 aa15.74■□□□□ 0.11
VRK3-207ENST00000594092 GDF15Q99988 308 aa15.74■□□□□ 0.11
VRK3-207ENST00000594092 ARHGEF38Q9NXL2 777 aa15.74■□□□□ 0.11
VRK3-207ENST00000594092 CWC15Q9P013 229 aaKnown RBP15.74■□□□□ 0.11
VRK3-207ENST00000594092 RCOR3Q9P2K3 495 aaPredicted RBP15.74■□□□□ 0.11
VRK3-207ENST00000594092 BHMG1C9JSJ3 638 aaPredicted RBP15.73■□□□□ 0.11
VRK3-207ENST00000594092 APOC4-APOC2K7ER74 178 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 LIASO43766 372 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 APOC2P02655 101 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 GOT1P17174 413 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 CCR1P32246 355 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 IRS1P35568 1242 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 PBX2P40425 430 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 TNNT3P45378 269 aaPredicted RBP15.73■□□□□ 0.11
VRK3-207ENST00000594092 CARSP49589 748 aaKnown RBP15.73■□□□□ 0.11
VRK3-207ENST00000594092 ERVK-21P61565 698 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 SEMA3BQ13214 749 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 BRMS1LQ5PSV4 323 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 C10orf120Q5SQS8 335 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 SNX30Q5VWJ9 437 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 SLC9A4Q6AI14 798 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 DNAJB7Q7Z6W7 309 aaPredicted RBP15.73■□□□□ 0.11
VRK3-207ENST00000594092 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.73■□□□□ 0.11
VRK3-207ENST00000594092 AENQ8WTP8 325 aaKnown RBP15.73■□□□□ 0.11
VRK3-207ENST00000594092 GRK7Q8WTQ7 553 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.73■□□□□ 0.11
VRK3-207ENST00000594092 ZNF512Q96ME7 567 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms