RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 DAB1O75553 588 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 CCDC172P0C7W6 258 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 TYRP14679 529 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 SCNN1AP37088 669 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 PITX1P78337 314 aaPredicted RBP15.17■□□□□ 0.02
VRK3-206ENST00000594090 KDSRQ06136 332 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 MESP2Q0VG99 397 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 FBXO43Q4G163 708 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 DCAF6Q58WW2 860 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 FIGNQ5HY92 759 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 NUGGCQ68CJ6 796 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 MAMSTRQ6ZN01 415 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 UNC45BQ8IWX7 931 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 DEFB106AQ8N104 65 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 PHTF2Q8N3S3 785 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 ZNF397Q8NF99 534 aaPredicted RBP15.17■□□□□ 0.02
VRK3-206ENST00000594090 BHMTQ93088 406 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 P2RY11Q96G91 374 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 SLC39A13Q96H72 371 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 FCRL2Q96LA5 508 aaPredicted RBP15.17■□□□□ 0.02
VRK3-206ENST00000594090 PCDHB18PQ96TA0 734 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 IRF2BPLQ9H1B7 796 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 ARHGEF4Q9NR80 690 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 IFNKQ9P0W0 207 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 TLR6Q9Y2C9 796 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 TULP3O75386 442 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 TRUB2O95900 331 aaKnown RBP15.16■□□□□ 0.02
VRK3-206ENST00000594090 APODP05090 189 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 UNGP13051 313 aaPredicted RBP15.16■□□□□ 0.02
VRK3-206ENST00000594090 MMP8P22894 467 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 CCR3P51677 355 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 ZNF445P59923 1031 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 SATB1Q01826 763 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 NHLH1Q02575 133 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 C2CD6Q53TS8 623 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 FYB2Q5VWT5 728 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 PKN3Q6P5Z2 889 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 IRF2BP2Q7Z5L9 587 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 SFTPA1Q8IWL2 248 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 SPEM1Q8N4L4 309 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 XPO6Q96QU8 1125 aaKnown RBP15.16■□□□□ 0.02
VRK3-206ENST00000594090 AGPAT1Q99943 283 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 EDEM3Q9BZQ6 932 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 DNAJC17Q9NVM6 304 aaKnown RBP15.16■□□□□ 0.02
VRK3-206ENST00000594090 PLK2Q9NYY3 685 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 DEC1Q9P2X7 70 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 STOML2Q9UJZ1 356 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 FBXO4Q9UKT5 387 aa15.16■□□□□ 0.02
VRK3-206ENST00000594090 K7EQS6 105 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 KAT7O95251 611 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 PENKP01210 267 aaPredicted RBP15.15■□□□□ 0.02
VRK3-206ENST00000594090 CYBBP04839 570 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 SP9P0CG40 484 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 SLC11A2P49281 568 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 CDK17Q00537 523 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 CENPCQ03188 943 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 EIF4EBP2Q13542 120 aaPredicted RBP15.15■□□□□ 0.02
VRK3-206ENST00000594090 ASIC2Q16515 512 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 CLEC16AQ2KHT3 1053 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 PREPLQ4J6C6 727 aaPredicted RBP15.15■□□□□ 0.02
VRK3-206ENST00000594090 ADGRF1Q5T601 910 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 FAM102AQ5T9C2 384 aaPredicted RBP15.15■□□□□ 0.02
VRK3-206ENST00000594090 MMS22LQ6ZRQ5 1243 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 TERB1Q8NA31 727 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 RNF214Q8ND24 703 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 SLC30A5Q8TAD4 765 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 ATOH1Q92858 354 aaPredicted RBP15.15■□□□□ 0.02
VRK3-206ENST00000594090 SYT11Q9BT88 431 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 NUP58Q9BVL2 599 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 XPO4Q9C0E2 1151 aaKnown RBP15.15■□□□□ 0.02
VRK3-206ENST00000594090 FAM204AQ9H8W3 233 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 FAM86C1Q9NVL1 165 aa15.15■□□□□ 0.02
VRK3-206ENST00000594090 GFRA2O00451 464 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 TRIM24O15164 1050 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 NOS2P35228 1153 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 GRIA2P42262 883 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 MATKP42679 507 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 SEC13P55735 322 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 CSTF1Q05048 431 aaKnown RBP15.14■□□□□ 0.01
VRK3-206ENST00000594090 FAM133BQ5BKY9 247 aaKnown RBP15.14■□□□□ 0.01
VRK3-206ENST00000594090 SFMBT2Q5VUG0 894 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 E4F1Q66K89 784 aaPredicted RBP15.14■□□□□ 0.01
VRK3-206ENST00000594090 NADSYN1Q6IA69 706 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 GRAMD4Q6IC98 578 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 TSSK4Q6SA08 328 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 RPLP0P6Q8NHW5 317 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 AZIN2Q96A70 460 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 SEPT11Q9NVA2 429 aaKnown RBP15.14■□□□□ 0.01
VRK3-206ENST00000594090 C2orf42Q9NWW7 574 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 DDIT4Q9NX09 232 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 AIPL1Q9NZN9 384 aa15.14■□□□□ 0.01
VRK3-206ENST00000594090 A0A0A0MRY4 1105 aa15.13■□□□□ 0.01
VRK3-206ENST00000594090 A0A1W2PQJ5 194 aa15.13■□□□□ 0.01
VRK3-206ENST00000594090 CHURC1-FNTBB4DL54 471 aa15.13■□□□□ 0.01
VRK3-206ENST00000594090 GOLGA8SH3BPF8 625 aa15.13■□□□□ 0.01
VRK3-206ENST00000594090 ACSL4O60488 711 aa15.13■□□□□ 0.01
VRK3-206ENST00000594090 ATG13O75143 517 aa15.13■□□□□ 0.01
VRK3-206ENST00000594090 PAPSS2O95340 614 aaPredicted RBP15.13■□□□□ 0.01
VRK3-206ENST00000594090 MOCS2O96007 188 aaPredicted RBP15.13■□□□□ 0.01
VRK3-206ENST00000594090 APOEP02649 317 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms