RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 MIR1-1HGQ9H1L0 117 aa18.34■□□□□ 0.53
RETREG3-212ENST00000593251 CLIC5Q9NZA1 410 aa18.34■□□□□ 0.53
RETREG3-212ENST00000593251 USP36Q9P275 1121 aaKnown RBP18.34■□□□□ 0.53
RETREG3-212ENST00000593251 AGO1Q9UL18 857 aaKnown RBP18.34■□□□□ 0.53
RETREG3-212ENST00000593251 ZNF510Q9Y2H8 683 aa18.34■□□□□ 0.53
RETREG3-212ENST00000593251 PCDHB9Q9Y5E1 797 aa18.34■□□□□ 0.53
RETREG3-212ENST00000593251 ADAMTS20P59510 1910 aa18.33■□□□□ 0.53
RETREG3-212ENST00000593251 MAPK13O15264 365 aa18.33■□□□□ 0.52
RETREG3-212ENST00000593251 KRT13P13646 458 aa18.33■□□□□ 0.52
RETREG3-212ENST00000593251 CHKAP35790 457 aa18.33■□□□□ 0.52
RETREG3-212ENST00000593251 COG7P83436 770 aa18.33■□□□□ 0.52
RETREG3-212ENST00000593251 SLC14A1Q13336 389 aa18.33■□□□□ 0.52
RETREG3-212ENST00000593251 COL9A2Q14055 689 aaPredicted RBP18.33■□□□□ 0.52
RETREG3-212ENST00000593251 ZNF234Q14588 700 aa18.33■□□□□ 0.52
RETREG3-212ENST00000593251 ZNF423Q2M1K9 1284 aa18.33■□□□□ 0.52
RETREG3-212ENST00000593251 ATL3Q6DD88 541 aa18.33■□□□□ 0.52
RETREG3-212ENST00000593251 INTS8Q75QN2 995 aaKnown RBP18.33■□□□□ 0.52
RETREG3-212ENST00000593251 ZNF276Q8N554 614 aa18.33■□□□□ 0.52
RETREG3-212ENST00000593251 SORCS1Q8WY21 1168 aa18.33■□□□□ 0.52
RETREG3-212ENST00000593251 PIWIL1Q96J94 861 aaKnown RBP18.33■□□□□ 0.52
RETREG3-212ENST00000593251 HEXIM2Q96MH2 286 aaKnown RBP18.33■□□□□ 0.52
RETREG3-212ENST00000593251 ITM2CQ9NQX7 267 aa18.33■□□□□ 0.52
RETREG3-212ENST00000593251 TP53BP1Q12888 1972 aaPredicted RBP18.33■□□□□ 0.52
RETREG3-212ENST00000593251 BAHCC1Q9P281 2608 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 A0A1B0GTW7 788 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 SLC12A8A0AV02 714 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 FAM221BA6H8Z2 402 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 TAF4O00268 1085 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 FTH1P19P0C7X4 201 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 PRKCHP24723 683 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 TPMTP51580 245 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 ENPP2Q13822 863 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 HNRNPDQ14103 355 aaKnown RBP18.32■□□□□ 0.52
RETREG3-212ENST00000593251 DCAF12L1Q5VU92 463 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 ANKS1BQ7Z6G8 1248 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 METTL3Q86U44 580 aaKnown RBP18.32■□□□□ 0.52
RETREG3-212ENST00000593251 TMPRSS6Q8IU80 811 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 UCMAQ8WVF2 138 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 DNASE2BQ8WZ79 361 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 SEMA4DQ92854 862 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 SIPA1Q96FS4 1042 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 DCLK3Q9C098 648 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 CIPCQ9C0C6 399 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 IL21RQ9HBE5 538 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 MARCH2Q9P0N8 246 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 LHX6Q9UPM6 363 aa18.32■□□□□ 0.52
RETREG3-212ENST00000593251 MUC22E2RYF6 1773 aaPredicted RBP18.32■□□□□ 0.52
RETREG3-212ENST00000593251 SYNCRIPO60506 623 aaKnown RBP18.31■□□□□ 0.52
RETREG3-212ENST00000593251 CMA1P23946 247 aa18.31■□□□□ 0.52
RETREG3-212ENST00000593251 COPAP53621 1224 aa18.31■□□□□ 0.52
RETREG3-212ENST00000593251 YWHAGP61981 247 aaKnown RBP eCLIP18.31■□□□□ 0.52
RETREG3-212ENST00000593251 TMEM215Q68D42 235 aa18.31■□□□□ 0.52
RETREG3-212ENST00000593251 RSRC2Q7L4I2 434 aaKnown RBP18.31■□□□□ 0.52
RETREG3-212ENST00000593251 FAM124AQ86V42 546 aa18.31■□□□□ 0.52
RETREG3-212ENST00000593251 PIGZQ86VD9 579 aa18.31■□□□□ 0.52
RETREG3-212ENST00000593251 HSCBQ8IWL3 235 aa18.31■□□□□ 0.52
RETREG3-212ENST00000593251 SLC4A11Q8NBS3 891 aa18.31■□□□□ 0.52
RETREG3-212ENST00000593251 CCDC150Q8NCX0 1101 aa18.31■□□□□ 0.52
RETREG3-212ENST00000593251 DDI1Q8WTU0 396 aa18.31■□□□□ 0.52
RETREG3-212ENST00000593251 NDRG1Q92597 394 aaKnown RBP18.31■□□□□ 0.52
RETREG3-212ENST00000593251 PRCCQ92733 491 aaPredicted RBP18.31■□□□□ 0.52
RETREG3-212ENST00000593251 CDK5RAP1Q96SZ6 601 aaKnown RBP18.31■□□□□ 0.52
RETREG3-212ENST00000593251 ARID3AQ99856 593 aa18.31■□□□□ 0.52
RETREG3-212ENST00000593251 TMEM8AQ9HCN3 771 aa18.31■□□□□ 0.52
RETREG3-212ENST00000593251 ELOVL2Q9NXB9 296 aa18.31■□□□□ 0.52
RETREG3-212ENST00000593251 HPSEQ9Y251 543 aa18.31■□□□□ 0.52
RETREG3-212ENST00000593251 RHOBTB3O94955 611 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 CYBBP04839 570 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 MYL1P05976 194 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 EPHX1P07099 455 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 HLA-EP13747 358 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 PSMC2P35998 433 aaKnown RBP18.3■□□□□ 0.52
RETREG3-212ENST00000593251 RAD23BP54727 409 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 BNC1Q01954 994 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 ADAM9Q13443 819 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 NFIL3Q16649 462 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 LRSAM1Q6UWE0 723 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 RBBP8NLQ8NC74 664 aaPredicted RBP18.3■□□□□ 0.52
RETREG3-212ENST00000593251 EEF2KMTQ96G04 330 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 TMEM176AQ96HP8 235 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 DNAI2Q9GZS0 605 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 CISHQ9NSE2 258 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 USP25Q9UHP3 1055 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 EIF2B4Q9UI10 523 aaKnown RBP18.3■□□□□ 0.52
RETREG3-212ENST00000593251 STRIP2Q9ULQ0 834 aa18.3■□□□□ 0.52
RETREG3-212ENST00000593251 ITPR1Q14643 2758 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 TULP2O00295 520 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 NPC1O15118 1278 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 TSPAN3O60637 253 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 CAPNS1P04632 268 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 ACADMP11310 421 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 TKTL1P51854 596 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 NDUFA8P51970 172 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 ZNF132P52740 706 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 SCAPQ12770 1279 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 RAB41Q5JT25 222 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 KRT39Q6A163 491 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 SERPINA13PQ6UXR4 307 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 SLCO6A1Q86UG4 719 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 PROSER1Q86XN7 944 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms