RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 CLCN5P51795 746 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 GSCP56915 257 aaPredicted RBP10.06□□□□□ -0.8
DDX39A-220ENST00000593008 YWHAZP63104 245 aaKnown RBP10.06□□□□□ -0.8
DDX39A-220ENST00000593008 ZNF268Q14587 947 aaPredicted RBP10.06□□□□□ -0.8
DDX39A-220ENST00000593008 UBXN2BQ14CS0 331 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 DCAF6Q58WW2 860 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 C10orf120Q5SQS8 335 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 BTBD8Q5XKL5 378 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 TXNRD3NBQ6F5E7 133 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 TPRG1Q6ZUI0 275 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 MFSD6LQ8IWD5 586 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 REXO1L1PQ8IX06 675 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 CMTM8Q8IZV2 173 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 SLC35G2Q8TBE7 412 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 IRGQQ8WZA9 623 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 MRPS31Q92665 395 aaKnown RBP10.06□□□□□ -0.8
DDX39A-220ENST00000593008 ZFRQ96KR1 1074 aaKnown RBP10.06□□□□□ -0.8
DDX39A-220ENST00000593008 PEBP4Q96S96 227 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 FBXO44Q9H4M3 255 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 FAM204AQ9H8W3 233 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 GKN1Q9NS71 199 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 PIGVQ9NUD9 493 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 TRPM5Q9NZQ8 1165 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 UXTQ9UBK9 157 aaPredicted RBP10.06□□□□□ -0.8
DDX39A-220ENST00000593008 XPO7Q9UIA9 1087 aaKnown RBP10.06□□□□□ -0.8
DDX39A-220ENST00000593008 ANAPC7Q9UJX3 599 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 STRIP2Q9ULQ0 834 aa10.06□□□□□ -0.8
DDX39A-220ENST00000593008 ZNF318Q5VUA4 2279 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 GRID2IPA4D2P6 1211 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 SIGLEC16A6NMB1 481 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 H0Y858 1186 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 PJA2O43164 708 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 OLFM2O95897 454 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 CKMP06732 381 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 CCDC175P0C221 793 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 MYBL1P10243 752 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 GPD1P21695 349 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 PSMA2P25787 234 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 HOXD11P31277 338 aaPredicted RBP10.05□□□□□ -0.8
DDX39A-220ENST00000593008 MARCKSL1P49006 195 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 HDAC4P56524 1084 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 STARD6P59095 220 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 TAS2R40P59535 323 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 TCF15Q12870 199 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 NME3Q13232 169 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 DCUN1D2Q6PH85 259 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 RSRC2Q7L4I2 434 aaKnown RBP10.05□□□□□ -0.8
DDX39A-220ENST00000593008 MON1AQ86VX9 555 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 SCML4Q8N228 414 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 MSANTD4Q8NCY6 345 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 DEPDC1BQ8WUY9 529 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 RFFLQ8WZ73 363 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 IRF7Q92985 503 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 USP13Q92995 863 aaPredicted RBP10.05□□□□□ -0.8
DDX39A-220ENST00000593008 E2F7Q96AV8 911 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 MYEOVQ96EZ4 313 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 P2RY11Q96G91 374 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 SHDQ96IW2 340 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 NPY6RQ99463 290 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 POPDC2Q9HBU9 364 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 TLR8Q9NR97 1041 aaKnown RBP10.05□□□□□ -0.8
DDX39A-220ENST00000593008 PARVAQ9NVD7 372 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 KLHL11Q9NVR0 708 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 ASNSD1Q9NWL6 643 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 GPATCH2LQ9NWQ4 482 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 COMMD8Q9NX08 183 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.05□□□□□ -0.82e-7■■■□□ 15.3
DDX39A-220ENST00000593008 EHD2Q9NZN4 543 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 SIT1Q9Y3P8 196 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 CPQQ9Y646 472 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 DENND4CQ5VZ89 1909 aa10.05□□□□□ -0.8
DDX39A-220ENST00000593008 TRAV19A0A0A6YYK7 116 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 KANSL1LA0AUZ9 987 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 SLC12A8A0AV02 714 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 FAM170BA6NMN3 283 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 M0QYT0 321 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 ARNTLO00327 626 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 CAPN9O14815 690 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 FANCGO15287 622 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 GALR2O43603 387 aaPredicted RBP10.04□□□□□ -0.8
DDX39A-220ENST00000593008 BUB1BO60566 1050 aaPredicted RBP10.04□□□□□ -0.8
DDX39A-220ENST00000593008 IPO7O95373 1038 aaKnown RBP10.04□□□□□ -0.8
DDX39A-220ENST00000593008 TRUB2O95900 331 aaKnown RBP10.04□□□□□ -0.8
DDX39A-220ENST00000593008 IGLV3-25P01717 112 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 MBL2P11226 248 aaPredicted RBP10.04□□□□□ -0.8
DDX39A-220ENST00000593008 PDGFRAP16234 1089 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 DDX6P26196 483 aaKnown RBP eCLIP10.04□□□□□ -0.8
DDX39A-220ENST00000593008 GJC1P36383 396 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 MATKP42679 507 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 SOX9P48436 509 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 PRKCQQ04759 706 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 TNK2Q07912 1038 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 FCHO2Q0JRZ9 810 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 MESDQ14696 234 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 EFHC1Q5JVL4 640 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 HECTD3Q5T447 861 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 SNX30Q5VWJ9 437 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 MSANTD2Q6P1R3 559 aa10.04□□□□□ -0.8
DDX39A-220ENST00000593008 CYP4V2Q6ZWL3 525 aaPredicted RBP10.04□□□□□ -0.8
DDX39A-220ENST00000593008 FAM131BQ86XD5 332 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms