RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 CLMPQ9H6B4 373 aa10.66□□□□□ -0.7
SMCO4P1-201ENST00000592909 VRTNQ9H8Y1 702 aa10.66□□□□□ -0.7
SMCO4P1-201ENST00000592909 KRT82Q9NSB4 513 aa10.66□□□□□ -0.7
SMCO4P1-201ENST00000592909 OSER1Q9NX31 292 aa10.66□□□□□ -0.7
SMCO4P1-201ENST00000592909 NXF1Q9UBU9 619 aaKnown RBP10.66□□□□□ -0.7
SMCO4P1-201ENST00000592909 CCDC39Q9UFE4 941 aa10.66□□□□□ -0.7
SMCO4P1-201ENST00000592909 DNMT3LQ9UJW3 386 aa10.66□□□□□ -0.7
SMCO4P1-201ENST00000592909 H3BQV1 296 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 ARHGAP6O43182 974 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 STC2O76061 302 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 KLKB1P03952 638 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 DLATP10515 647 aaKnown RBP10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 ACTN2P35609 894 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 ACADVLP49748 655 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 CLDN6P56747 220 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 RACK1P63244 317 aaKnown RBP10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 IL9RQ01113 521 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 RHDQ02161 417 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 ZBTB16Q05516 673 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 TRPC3Q13507 836 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 TAF1BQ53T94 588 aaPredicted RBP10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 HES3Q5TGS1 186 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 RRAGBQ5VZM2 374 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 LAYNQ6UX15 382 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 SERPINA13PQ6UXR4 307 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 CACUL1Q86Y37 369 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 SPACA3Q8IXA5 215 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 TSC1Q92574 1164 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 ZNF516Q92618 1163 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 SYAP1Q96A49 352 aaPredicted RBP10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 CNDP2Q96KP4 475 aaKnown RBP10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 ELF4Q99607 663 aaPredicted RBP10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 SLC2A11Q9BYW1 496 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 PANK4Q9NVE7 773 aa10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMCO4P1-201ENST00000592909 CBX4O00257 560 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 MDM4O15151 490 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 BRINP1O60477 761 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 FSBPO95073 299 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 RARGP13631 454 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 BCAT1P54687 386 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 C21orf59P57076 290 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 MAP3K7CLP57077 242 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 CXADRP78310 365 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 KCNC4Q03721 635 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 CYP24A1Q07973 514 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 DNAJC3Q13217 504 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 ILKQ13418 452 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 SHBQ15464 509 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 SNRNP35Q16560 246 aaKnown RBP10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 BMT2Q1RMZ1 405 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 TBC1D25Q3MII6 688 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 TMEM215Q68D42 235 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 STXBP4Q6ZWJ1 553 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 ADAT2Q7Z6V5 191 aaKnown RBP10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 TADA2BQ86TJ2 420 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 ERICH1Q86X53 443 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 GATAD2AQ86YP4 633 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 CRYBG2Q8N1P7 616 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 RDH13Q8NBN7 331 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 SLC2A14Q8TDB8 520 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 SAP25Q8TEE9 199 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 SORCS1Q8WY21 1168 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 ACE2Q9BYF1 805 aaPredicted RBP10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 DCLK3Q9C098 648 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 CIPCQ9C0C6 399 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 TMEM245Q9H330 911 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 SMYD3Q9H7B4 428 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 FBRSQ9HAH7 460 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 NMUR1Q9HB89 426 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 SGK2Q9HBY8 427 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 CLEC4EQ9ULY5 219 aa10.64□□□□□ -0.71
SMCO4P1-201ENST00000592909 NUMA1Q14980 2115 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 A0A1W2PPC4 97 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 A0A1W2PQH9 124 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 B8ZZF3 427 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 HHLA1C9JL84 531 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 YKT6O15498 198 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 CYP26A1O43174 497 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 CYBBP04839 570 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 IGHV4-34P06331 123 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 ITGAVP06756 1048 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 HOXD13P35453 343 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 PSEN1P49768 467 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 RPS14P62263 151 aaKnown RBP10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 COG7P83436 770 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 PDE4CQ08493 712 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 CCDC173Q0VFZ6 552 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 KCNH2Q12809 1159 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 PKDCCQ504Y2 493 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 C10orf120Q5SQS8 335 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 PRAMEF14Q5SWL7 426 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 GPRIN1Q7Z2K8 1008 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 ACOT1Q86TX2 421 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 CPXM2Q8N436 756 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 RFFLQ8WZ73 363 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 SKA1Q96BD8 255 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 CCDC127Q96BQ5 260 aa10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 GZF1Q9H116 711 aaPredicted RBP10.63□□□□□ -0.71
SMCO4P1-201ENST00000592909 NUDT5Q9UKK9 219 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms