RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 COPEO14579 308 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 DGKIO75912 1065 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 GNAT1P11488 350 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 NPR3P17342 541 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 FDFT1P37268 417 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 ETV4P43268 484 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 TWF2Q6IBS0 349 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 PYROXD2Q8N2H3 581 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 CCDC33Q8N5R6 958 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 HTR3CQ8WXA8 447 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 SIGLEC10Q96LC7 697 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 OLFM3Q96PB7 478 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 FAM111AQ96PZ2 611 aa17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 EBNA1BP2Q99848 306 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-217ENST00000592741 A0A0A0MRY4 1105 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 CXorf49A8MYA2 514 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 H3BRJ5 948 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 CYB561D2O14569 222 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 FAM155BO75949 473 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 STK10O94804 968 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 CELF2O95319 508 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 KRT16P08779 473 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 NEFHP12036 1026 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 PTPN1P18031 435 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 NOS2P35228 1153 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 MRPS5P82675 430 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 BEX3Q00994 111 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 DCAF6Q58WW2 860 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 NLRP9Q7RTR0 991 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 TTC17Q96AE7 1141 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 SPATA13Q96N96 652 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 RAB3IPQ96QF0 476 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 TSSK1BQ9BXA7 367 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 PLAC1Q9HBJ0 212 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 LRRC4Q9HBW1 653 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 ALG13Q9NP73 1137 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 STAP1Q9ULZ2 295 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 TRIM33Q9UPN9 1127 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 PCDHA11Q9Y5I1 949 aa17.13■□□□□ 0.33
PRKCSH-217ENST00000592741 KRT38O76015 456 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 FAM163BP0C2L3 166 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 VAV1P15498 845 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 SPDYAQ5MJ70 313 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 DENND5BQ6ZUT9 1274 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 HACE1Q8IYU2 909 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 SIX6OS1Q8N1H7 587 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 KCTD13Q8WZ19 329 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 NDRG1Q92597 394 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 MTBPQ96DY7 904 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 FERMT1Q9BQL6 677 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 MED10Q9BTT4 135 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 ARHGEF4Q9NR80 690 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 MFHAS1Q9Y4C4 1052 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 TRIP12Q14669 1992 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 CLDN5O00501 218 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 MFSD11O43934 449 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 ACAT1P24752 427 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 ANKRD20A2Q5SQ80 823 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 ANKRD20A1Q5TYW2 823 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 ANKRD20A3Q5VUR7 823 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 RNF139Q8WU17 664 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 PTPRN2Q92932 1015 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 PPP1R10Q96QC0 940 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 SRPK1Q96SB4 655 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 TRIM55Q9BYV6 548 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 LRMDAQ9H2I8 198 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 SMYD2Q9NRG4 433 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 STK38LQ9Y2H1 464 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 Q9Y3F1 56 aa17.12■□□□□ 0.33
PRKCSH-217ENST00000592741 FAM159BA6NKW6 160 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 PTGESO14684 152 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 CCNFP41002 786 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 SERPINB4P48594 390 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 CDK16Q00536 496 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 OTUD1Q5VV17 481 aaPredicted RBP17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 WSCD1Q658N2 575 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 CEP57Q86XR8 500 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 MPP5Q8N3R9 675 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 NPY6RQ99463 290 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 ZFP69BQ9UJL9 534 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 SF3B1O75533 1304 aaKnown RBP eCLIP17.11■□□□□ 0.331e-6■■■■■ 66.8
PRKCSH-217ENST00000592741 SYNJ2BP-COX16A0A087WUM0 186 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 FAM200BP0CF97 657 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 CSH1P0DML2 217 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 CSH2P0DML3 217 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 MLNP12872 115 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 BGNP21810 368 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 TARSP26639 723 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 SERPINB9P50453 376 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 OVGP1Q12889 678 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 CCL14Q16627 93 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 MDH1BQ5I0G3 518 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 CLEC20AQ6ZU45 233 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 DEPDC1BQ8WUY9 529 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 NT5C3BQ969T7 300 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 SLC2A13Q96QE2 648 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 MKS1Q9NXB0 559 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 COX16Q9P0S2 106 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 DCTN4Q9UJW0 460 aa17.11■□□□□ 0.33
PRKCSH-217ENST00000592741 VGLL3A8MV65 326 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms