RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 THAP10Q9P2Z0 257 aaPredicted RBP19.76■□□□□ 0.75
CCDC43-205ENST00000592333 AGO1Q9UL18 857 aaKnown RBP19.76■□□□□ 0.75
CCDC43-205ENST00000592333 HBS1LQ9Y450 684 aaKnown RBP19.76■□□□□ 0.75
CCDC43-205ENST00000592333 LATS1O95835 1130 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 SETSIPP0DME0 302 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 VDRP11473 427 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 ENGP17813 658 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 ITPKAP23677 461 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 GFPT1Q06210 699 aaPredicted RBP19.75■□□□□ 0.75
CCDC43-205ENST00000592333 TRIP4Q15650 581 aaPredicted RBP19.75■□□□□ 0.75
CCDC43-205ENST00000592333 DCAF17Q5H9S7 520 aaPredicted RBP19.75■□□□□ 0.75
CCDC43-205ENST00000592333 KIAA1211LQ6NV74 962 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 SMARCE1Q969G3 411 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 EEF2KMTQ96G04 330 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 DHTKD1Q96HY7 919 aaPredicted RBP19.75■□□□□ 0.75
CCDC43-205ENST00000592333 PIWIL1Q96J94 861 aaKnown RBP19.75■□□□□ 0.75
CCDC43-205ENST00000592333 CEP63Q96MT8 703 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 SLC32A1Q9H598 525 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 LRRC4Q9HBW1 653 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 GDPD2Q9HCC8 539 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 SUSD2Q9UGT4 822 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 STOML2Q9UJZ1 356 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 TSPAN16Q9UKR8 245 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 STON1Q9Y6Q2 735 aa19.75■□□□□ 0.75
CCDC43-205ENST00000592333 PSMA7O14818 248 aa19.74■□□□□ 0.75
CCDC43-205ENST00000592333 PAEPP09466 180 aa19.74■□□□□ 0.75
CCDC43-205ENST00000592333 WASP42768 502 aa19.74■□□□□ 0.75
CCDC43-205ENST00000592333 HARS2P49590 506 aaKnown RBP19.74■□□□□ 0.75
CCDC43-205ENST00000592333 CETN1Q12798 172 aa19.74■□□□□ 0.75
CCDC43-205ENST00000592333 HNRNPDQ14103 355 aaKnown RBP19.74■□□□□ 0.75
CCDC43-205ENST00000592333 STILQ15468 1287 aa19.74■□□□□ 0.75
CCDC43-205ENST00000592333 MPPE1Q53F39 396 aa19.74■□□□□ 0.75
CCDC43-205ENST00000592333 SYCP2LQ5T4T6 812 aa19.74■□□□□ 0.75
CCDC43-205ENST00000592333 ANKS1BQ7Z6G8 1248 aa19.74■□□□□ 0.75
CCDC43-205ENST00000592333 DENND1CQ8IV53 801 aa19.74■□□□□ 0.75
CCDC43-205ENST00000592333 CAPN10Q9HC96 672 aa19.74■□□□□ 0.75
CCDC43-205ENST00000592333 CNGB3Q9NQW8 809 aa19.74■□□□□ 0.75
CCDC43-205ENST00000592333 ABCC13Q9NSE7 274 aa19.74■□□□□ 0.75
CCDC43-205ENST00000592333 PLK2Q9NYY3 685 aa19.74■□□□□ 0.75
CCDC43-205ENST00000592333 SLC12A8A0AV02 714 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 P4HA2O15460 535 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 NDUFS2O75306 463 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 SYPP08247 313 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 C7P10643 843 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 ATXN3P54252 364 aaPredicted RBP19.73■□□□□ 0.75
CCDC43-205ENST00000592333 BECN1Q14457 450 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 GOLGA7BQ2TAP0 167 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 WDR45BQ5MNZ6 344 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 LCLAT1Q6UWP7 414 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 ARMCX6Q7L4S7 300 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 UBR7Q8N806 425 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 CADM4Q8NFZ8 388 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 RNF139Q8WU17 664 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 IPO9Q96P70 1041 aaKnown RBP19.73■□□□□ 0.75
CCDC43-205ENST00000592333 ULBP1Q9BZM6 244 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 ELOVL2Q9NXB9 296 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 CACNA2D2Q9NY47 1150 aa19.73■□□□□ 0.75
CCDC43-205ENST00000592333 MAP1BP46821 2468 aaKnown RBP19.73■□□□□ 0.75
CCDC43-205ENST00000592333 O00370 1275 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 CFIP05156 583 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 GNSP15586 552 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 CD6P30203 668 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 OXTRP30559 389 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 ZNF252P-AS1Q0IIN9 211 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 SEMA3BQ13214 749 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 SLC14A1Q13336 389 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 PKDCCQ504Y2 493 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 BHLHA9Q7RTU4 235 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 SIX6OS1Q8N1H7 587 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 HDDC3Q8N4P3 179 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 ZNF557Q8N988 423 aaPredicted RBP19.72■□□□□ 0.75
CCDC43-205ENST00000592333 DDI1Q8WTU0 396 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 IRGQQ8WZA9 623 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 BHMTQ93088 406 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 CEP295Q9C0D2 2601 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 PRDM16Q9HAZ2 1276 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 ITM2CQ9NQX7 267 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 USP36Q9P275 1121 aaKnown RBP19.72■□□□□ 0.75
CCDC43-205ENST00000592333 CYP8B1Q9UNU6 501 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 PI4KAP42356 2102 aa19.72■□□□□ 0.75
CCDC43-205ENST00000592333 CEP192Q8TEP8 1941 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 ARHGAP33O14559 1287 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 SYNCRIPO60506 623 aaKnown RBP19.71■□□□□ 0.75
CCDC43-205ENST00000592333 IGLV3-19P01714 112 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 HMBSP08397 361 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 FMO5P49326 533 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 PMS1P54277 932 aaKnown RBP19.71■□□□□ 0.75
CCDC43-205ENST00000592333 CNGA2Q16280 664 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 GEN1Q17RS7 908 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 UAP1L1Q3KQV9 507 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 FUT11Q495W5 492 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 MPP7Q5T2T1 576 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 ADGRF1Q5T601 910 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 BSPRYQ5W0U4 402 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 PIP4P1Q86T03 277 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 FMNL3Q8IVF7 1028 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 SLC41A1Q8IVJ1 513 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 TRIML1Q8N9V2 468 aa19.71■□□□□ 0.75
CCDC43-205ENST00000592333 RBBP8NLQ8NC74 664 aaPredicted RBP19.71■□□□□ 0.75
CCDC43-205ENST00000592333 P2RY11Q96G91 374 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms