RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 SLC4A11Q8NBS3 891 aa18.28■□□□□ 0.52
CIRBP-235ENST00000591935 DUSP16Q9BY84 665 aa18.28■□□□□ 0.52
CIRBP-235ENST00000591935 ARHGEF4Q9NR80 690 aa18.28■□□□□ 0.52
CIRBP-235ENST00000591935 LSM7Q9UK45 103 aaKnown RBP18.28■□□□□ 0.52
CIRBP-235ENST00000591935 MMP17Q9ULZ9 603 aa18.28■□□□□ 0.52
CIRBP-235ENST00000591935 COQ4Q9Y3A0 265 aa18.28■□□□□ 0.52
CIRBP-235ENST00000591935 PCDHGA5Q9Y5G8 931 aa18.28■□□□□ 0.52
CIRBP-235ENST00000591935 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.28■□□□□ 0.52
CIRBP-235ENST00000591935 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.28■□□□□ 0.52
CIRBP-235ENST00000591935 MDM4O15151 490 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 HOXC11O43248 304 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-235ENST00000591935 ALDH1A2O94788 518 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 RHOBTB1O94844 696 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 EPN2O95208 641 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 DGKEP52429 567 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 KIF11P52732 1056 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 KRT83P78385 493 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 TUBB2AQ13885 445 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 ELF2Q15723 593 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 USP39Q53GS9 565 aaKnown RBP18.27■□□□□ 0.52
CIRBP-235ENST00000591935 WDR59Q6PJI9 974 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 HTR3DQ70Z44 454 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 NAT16Q8N8M0 369 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 NEK11Q8NG66 645 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 KCNV2Q8TDN2 545 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 SYN2Q92777 582 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-235ENST00000591935 TMEM176AQ96HP8 235 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 CDK5RAP1Q96SZ6 601 aaKnown RBP18.27■□□□□ 0.52
CIRBP-235ENST00000591935 TUBB2BQ9BVA1 445 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 ZDHHC4Q9NPG8 344 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 SPHK2Q9NRA0 654 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 DNAI1Q9UI46 699 aa18.27■□□□□ 0.52
CIRBP-235ENST00000591935 DCLK1O15075 740 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 NDUFA10O95299 355 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 RARGP13631 454 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 HNRNPLP14866 589 aaKnown RBP eCLIP18.26■□□□□ 0.51
CIRBP-235ENST00000591935 CASQ1P31415 396 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 PLA2G4AP47712 749 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 SLC8A3P57103 927 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 KDSRQ06136 332 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 PHTF2Q8N3S3 785 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 ZNF276Q8N554 614 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 SLC35C1Q96A29 364 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 UBXN6Q9BZV1 441 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 ARRDC1-AS1Q9H2J1 176 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.26■□□□□ 0.51
CIRBP-235ENST00000591935 DEC1Q9P2X7 70 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 ARMCX3Q9UH62 379 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-235ENST00000591935 DNMT3LQ9UJW3 386 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 INVSQ9Y283 1065 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 USP3Q9Y6I4 520 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 THADAQ6YHU6 1953 aa18.26■□□□□ 0.51
CIRBP-235ENST00000591935 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-235ENST00000591935 TBC1D3BA6NDS4 549 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 EIF3CLB5ME19 914 aaKnown RBP18.25■□□□□ 0.51
CIRBP-235ENST00000591935 SLC30A4O14863 429 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 TRIM24O15164 1050 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 KIF5CO60282 957 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 SLU7O95391 586 aaKnown RBP18.25■□□□□ 0.51
CIRBP-235ENST00000591935 ZNF806P0C7X5 589 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 RALAP11233 206 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 GNG11P61952 73 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 YWHAEP62258 255 aaKnown RBP18.25■□□□□ 0.51
CIRBP-235ENST00000591935 CCDC6Q16204 474 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 CRY1Q16526 586 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 ANO4Q32M45 955 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 PLK5Q496M5 336 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 EOGTQ5NDL2 527 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 TMEM92Q6UXU6 159 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 TRMT11Q7Z4G4 463 aaKnown RBP18.25■□□□□ 0.51
CIRBP-235ENST00000591935 MTERF4Q7Z6M4 381 aaKnown RBP18.25■□□□□ 0.51
CIRBP-235ENST00000591935 RASSF3Q86WH2 238 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 ETFBKMTQ8IXQ9 262 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 C12orf50Q8NA57 414 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-235ENST00000591935 EIF3CQ99613 913 aaKnown RBP18.25■□□□□ 0.51
CIRBP-235ENST00000591935 CHP1Q99653 195 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 DESI2Q9BSY9 194 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 POLMQ9NP87 494 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-235ENST00000591935 CLIC5Q9NZA1 410 aa18.25■□□□□ 0.51
CIRBP-235ENST00000591935 NUP205Q92621 2012 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 MED19A0JLT2 244 aaPredicted RBP18.24■□□□□ 0.51
CIRBP-235ENST00000591935 TULP3O75386 442 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 TIE1P35590 1138 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 KIR2DL1P43626 348 aaPredicted RBP18.24■□□□□ 0.51
CIRBP-235ENST00000591935 KCNMA1Q12791 1236 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 CUL2Q13617 745 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 ARHGAP17Q68EM7 881 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 TTC30AQ86WT1 665 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 ARHGAP18Q8N392 663 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 ALLCQ8N6M5 410 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 IL17RCQ8NAC3 791 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 TXNDC5Q8NBS9 432 aaKnown RBP18.24■□□□□ 0.51
CIRBP-235ENST00000591935 DDX1Q92499 740 aaKnown RBP18.24■□□□□ 0.51
CIRBP-235ENST00000591935 XPO6Q96QU8 1125 aaKnown RBP18.24■□□□□ 0.51
CIRBP-235ENST00000591935 TPSD1Q9BZJ3 242 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 DUSP15Q9H1R2 295 aaPredicted RBP18.24■□□□□ 0.51
CIRBP-235ENST00000591935 HAUS4Q9H6D7 363 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 WDR35Q9P2L0 1181 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 NAGPAQ9UK23 515 aa18.24■□□□□ 0.51
CIRBP-235ENST00000591935 DAAM1Q9Y4D1 1078 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms