RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 PABPC3Q9H361 631 aaKnown RBP20.2■□□□□ 0.82
SPHK1-207ENST00000590959 PRO3102Q9H379 93 aa20.2■□□□□ 0.82
SPHK1-207ENST00000590959 MTRF1LQ9UGC7 380 aaKnown RBP20.2■□□□□ 0.82
SPHK1-207ENST00000590959 NOVA2Q9UNW9 492 aaKnown RBP20.2■□□□□ 0.82
SPHK1-207ENST00000590959 ENDOD1O94919 500 aa20.19■□□□□ 0.82
SPHK1-207ENST00000590959 ECEL1O95672 775 aa20.19■□□□□ 0.82
SPHK1-207ENST00000590959 CD48P09326 243 aa20.19■□□□□ 0.82
SPHK1-207ENST00000590959 KCNJ1P48048 391 aa20.19■□□□□ 0.82
SPHK1-207ENST00000590959 SEC24CP53992 1094 aa20.19■□□□□ 0.82
SPHK1-207ENST00000590959 KRT81Q14533 505 aa20.19■□□□□ 0.82
SPHK1-207ENST00000590959 ERMARDQ5T6L9 678 aa20.19■□□□□ 0.82
SPHK1-207ENST00000590959 KCNT2Q6UVM3 1135 aa20.19■□□□□ 0.82
SPHK1-207ENST00000590959 TRIM51Q9BSJ1 452 aa20.19■□□□□ 0.82
SPHK1-207ENST00000590959 SNRNP25Q9BV90 132 aaKnown RBP20.19■□□□□ 0.82
SPHK1-207ENST00000590959 TRIM62Q9BVG3 475 aa20.19■□□□□ 0.82
SPHK1-207ENST00000590959 RRN3Q9NYV6 651 aa20.19■□□□□ 0.82
SPHK1-207ENST00000590959 FYNP06241 537 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 CPB1P15086 417 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 ARSEP51690 589 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 MNAT1P51948 309 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 SLC5A3P53794 718 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 SMARCB1Q12824 385 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 IFT88Q13099 833 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 SYPL2Q5VXT5 272 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 BHLHA9Q7RTU4 235 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 SCN4BQ8IWT1 228 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 FIBCD1Q8N539 461 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 ATL2Q8NHH9 583 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 IGSF21Q96ID5 467 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 NAALADL1Q9UQQ1 740 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 YBX2Q9Y2T7 364 aaKnown RBP20.18■□□□□ 0.82
SPHK1-207ENST00000590959 SZT2Q5T011 3432 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 NLRC5Q86WI3 1866 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 VWA8A3KMH1 1905 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 M0QYT0 321 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 TBC1D4O60343 1298 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 CST8O60676 142 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 EFEMP2O95967 443 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 NCAM1P13591 858 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 RDXP35241 583 aaKnown RBP20.18■□□□□ 0.82
SPHK1-207ENST00000590959 MAGEA11P43364 429 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 ATXN1P54253 815 aaKnown RBP20.18■□□□□ 0.82
SPHK1-207ENST00000590959 GPR17Q13304 367 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 SLMAPQ14BN4 828 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 USP41Q3LFD5 358 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 FBXW10Q5XX13 1052 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 DENND2CQ68D51 928 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 BBS12Q6ZW61 710 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 TAS1R1Q7RTX1 841 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 BNIPLQ7Z465 357 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 VSIG1Q86XK7 387 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 TDHQ8IZJ6 230 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 C8orf48Q96LL4 319 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 PGLYRP2Q96PD5 576 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 MAK16Q9BXY0 300 aaKnown RBP20.18■□□□□ 0.82
SPHK1-207ENST00000590959 KDM4CQ9H3R0 1056 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 ZDHHC18Q9NUE0 388 aa20.18■□□□□ 0.82
SPHK1-207ENST00000590959 BCCIPQ9P287 314 aaKnown RBP eCLIP20.18■□□□□ 0.82
SPHK1-207ENST00000590959 LINC01553A4QN01 128 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 TNFRSF10BO14763 440 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 CHUKO15111 745 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 GAS8O95995 478 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 CA3P07451 260 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 PMS2P54278 862 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 ARPP19P56211 112 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 MAGOHP61326 146 aaKnown RBP20.17■□□□□ 0.82
SPHK1-207ENST00000590959 DPYSL3Q14195 570 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 ZC3H12AQ5D1E8 599 aaKnown RBP20.17■□□□□ 0.82
SPHK1-207ENST00000590959 C6orf118Q5T5N4 469 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 DRICH1Q6PGQ1 229 aaPredicted RBP20.17■□□□□ 0.82
SPHK1-207ENST00000590959 SYDE1Q6ZW31 735 aaPredicted RBP20.17■□□□□ 0.82
SPHK1-207ENST00000590959 RFX6Q8HWS3 928 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 COLGALT1Q8NBJ5 622 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 TTC13Q8NBP0 860 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 SCAMP5Q8TAC9 235 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 CLP1Q92989 425 aaKnown RBP20.17■□□□□ 0.82
SPHK1-207ENST00000590959 SEC16BQ96JE7 1060 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 CCDC114Q96M63 670 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 ZNF558Q96NG5 402 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 PBX4Q9BYU1 374 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 GPATCH2LQ9NWQ4 482 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 PTPRDP23468 1912 aa20.17■□□□□ 0.82
SPHK1-207ENST00000590959 CARNS1A5YM72 827 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 AGTP01019 485 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 LMNB2Q03252 620 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 DEUP1Q05D60 604 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 TFDP2Q14188 446 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 PPP1R7Q15435 360 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 OTUD1Q5VV17 481 aaPredicted RBP20.16■□□□□ 0.82
SPHK1-207ENST00000590959 BSPRYQ5W0U4 402 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 FAM131BQ86XD5 332 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 CCDC13Q8IYE1 715 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 RNF168Q8IYW5 571 aaPredicted RBP20.16■□□□□ 0.82
SPHK1-207ENST00000590959 ATAD1Q8NBU5 361 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 OR2W6PQ8NHA6 318 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 SLC7A14Q8TBB6 771 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 SPPL2BQ8TCT7 592 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 CHMP6Q96FZ7 201 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 VN1R3Q9BXE9 311 aa20.16■□□□□ 0.82
SPHK1-207ENST00000590959 FRMD8P1Q9BZ68 369 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms