RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 PDE4CQ08493 712 aa22.79■■□□□ 1.24
DDX39A-215ENST00000590696 SEMA3BQ13214 749 aa22.79■■□□□ 1.24
DDX39A-215ENST00000590696 GOLGA7BQ2TAP0 167 aa22.79■■□□□ 1.24
DDX39A-215ENST00000590696 FUT11Q495W5 492 aa22.79■■□□□ 1.24
DDX39A-215ENST00000590696 PM20D1Q6GTS8 502 aa22.79■■□□□ 1.24
DDX39A-215ENST00000590696 RGL4Q8IZJ4 473 aa22.79■■□□□ 1.24
DDX39A-215ENST00000590696 UCMAQ8WVF2 138 aa22.79■■□□□ 1.24
DDX39A-215ENST00000590696 PIWIL1Q96J94 861 aaKnown RBP22.79■■□□□ 1.24
DDX39A-215ENST00000590696 TSG101Q99816 390 aa22.79■■□□□ 1.24
DDX39A-215ENST00000590696 ULBP1Q9BZM6 244 aa22.79■■□□□ 1.24
DDX39A-215ENST00000590696 TSPAN16Q9UKR8 245 aa22.79■■□□□ 1.24
DDX39A-215ENST00000590696 CLEC4EQ9ULY5 219 aa22.79■■□□□ 1.24
DDX39A-215ENST00000590696 COQ4Q9Y3A0 265 aa22.79■■□□□ 1.24
DDX39A-215ENST00000590696 ASCC3Q8N3C0 2202 aaKnown RBP22.79■■□□□ 1.24
DDX39A-215ENST00000590696 ARHGAP33O14559 1287 aa22.78■■□□□ 1.24
DDX39A-215ENST00000590696 XPO1O14980 1071 aaKnown RBP22.78■■□□□ 1.24
DDX39A-215ENST00000590696 NPC1O15118 1278 aa22.78■■□□□ 1.24
DDX39A-215ENST00000590696 SLC16A3O15427 465 aaKnown RBP22.78■■□□□ 1.24
DDX39A-215ENST00000590696 CUL2Q13617 745 aa22.78■■□□□ 1.24
DDX39A-215ENST00000590696 SGO2Q562F6 1265 aa22.78■■□□□ 1.24
DDX39A-215ENST00000590696 ZNF658Q5TYW1 1059 aaPredicted RBP22.78■■□□□ 1.24
DDX39A-215ENST00000590696 ANKRD40Q6AI12 368 aa22.78■■□□□ 1.24
DDX39A-215ENST00000590696 UNQ6494/PRO21346Q6UXR6 183 aa22.78■■□□□ 1.24
DDX39A-215ENST00000590696 PIP4P1Q86T03 277 aa22.78■■□□□ 1.24
DDX39A-215ENST00000590696 FMR1NBQ8N0W7 255 aaPredicted RBP22.78■■□□□ 1.24
DDX39A-215ENST00000590696 CPXM2Q8N436 756 aa22.78■■□□□ 1.24
DDX39A-215ENST00000590696 DDI1Q8WTU0 396 aa22.78■■□□□ 1.24
DDX39A-215ENST00000590696 PLD4Q96BZ4 506 aa22.78■■□□□ 1.24
DDX39A-215ENST00000590696 PRDM16Q9HAZ2 1276 aa22.78■■□□□ 1.24
DDX39A-215ENST00000590696 FRYQ5TBA9 3013 aa22.78■■□□□ 1.24
DDX39A-215ENST00000590696 ZFHX4Q86UP3 3567 aa22.78■■□□□ 1.24
DDX39A-215ENST00000590696 UPK3BL1B0FP48 263 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 UPK3BL2E5RIL1 263 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 OPHN1O60890 802 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 CD6P30203 668 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 ZNF132P52740 706 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 PMS1P54277 932 aaKnown RBP22.77■■□□□ 1.24
DDX39A-215ENST00000590696 BCAT1P54687 386 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 FKBP3Q00688 224 aaKnown RBP22.77■■□□□ 1.24
DDX39A-215ENST00000590696 ENPP2Q13822 863 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 COBLL1Q53SF7 1204 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 SYCP2LQ5T4T6 812 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 BHLHA9Q7RTU4 235 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 ANKS1BQ7Z6G8 1248 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 METTL3Q86U44 580 aaKnown RBP22.77■■□□□ 1.24
DDX39A-215ENST00000590696 ZC3H3Q8IXZ2 948 aaKnown RBP22.77■■□□□ 1.24
DDX39A-215ENST00000590696 MINDY1Q8N5J2 469 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 OR2I1PQ8NGU4 316 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 GSDMAQ96QA5 445 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 SCNM1Q9BWG6 230 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 MKRN2Q9H000 416 aaKnown RBP22.77■■□□□ 1.24
DDX39A-215ENST00000590696 LRRC4Q9HBW1 653 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 OLA1Q9NTK5 396 aaKnown RBP22.77■■□□□ 1.24
DDX39A-215ENST00000590696 ELOVL2Q9NXB9 296 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 HESX1Q9UBX0 185 aa22.77■■□□□ 1.24
DDX39A-215ENST00000590696 PCDH15Q96QU1 1955 aa22.76■■□□□ 1.23
DDX39A-215ENST00000590696 SYPP08247 313 aa22.76■■□□□ 1.23
DDX39A-215ENST00000590696 CD19P15391 556 aa22.76■■□□□ 1.23
DDX39A-215ENST00000590696 YWHAEP62258 255 aaKnown RBP22.76■■□□□ 1.23
DDX39A-215ENST00000590696 BST2Q10589 180 aaKnown RBP22.76■■□□□ 1.23
DDX39A-215ENST00000590696 LRMPQ12912 555 aa22.76■■□□□ 1.23
DDX39A-215ENST00000590696 ZNF234Q14588 700 aa22.76■■□□□ 1.23
DDX39A-215ENST00000590696 TRIP4Q15650 581 aaPredicted RBP22.76■■□□□ 1.23
DDX39A-215ENST00000590696 FMNL3Q8IVF7 1028 aa22.76■■□□□ 1.23
DDX39A-215ENST00000590696 FAM217AQ8IXS0 508 aa22.76■■□□□ 1.23
DDX39A-215ENST00000590696 UBA3Q8TBC4 463 aa22.76■■□□□ 1.23
DDX39A-215ENST00000590696 FOXJ1Q92949 421 aa22.76■■□□□ 1.23
DDX39A-215ENST00000590696 TOE1Q96GM8 510 aaKnown RBP22.76■■□□□ 1.23
DDX39A-215ENST00000590696 SLC2A11Q9BYW1 496 aa22.76■■□□□ 1.23
DDX39A-215ENST00000590696 ADAM33Q9BZ11 813 aa22.76■■□□□ 1.23
DDX39A-215ENST00000590696 ITM2CQ9NQX7 267 aa22.76■■□□□ 1.23
DDX39A-215ENST00000590696 WSB2Q9NYS7 404 aaPredicted RBP22.76■■□□□ 1.23
DDX39A-215ENST00000590696 USP36Q9P275 1121 aaKnown RBP22.76■■□□□ 1.23
DDX39A-215ENST00000590696 SPAARA0A1B0GVQ0 90 aa22.75■■□□□ 1.23
DDX39A-215ENST00000590696 TRIM49BA6NDI0 452 aa22.75■■□□□ 1.23
DDX39A-215ENST00000590696 SYNCRIPO60506 623 aaKnown RBP22.75■■□□□ 1.23
DDX39A-215ENST00000590696 MAOBP27338 520 aa22.75■■□□□ 1.23
DDX39A-215ENST00000590696 ADIGQ0VDE8 80 aa22.75■■□□□ 1.23
DDX39A-215ENST00000590696 PLEKHG6Q3KR16 790 aa22.75■■□□□ 1.23
DDX39A-215ENST00000590696 WDR45BQ5MNZ6 344 aa22.75■■□□□ 1.23
DDX39A-215ENST00000590696 TMPRSS6Q8IU80 811 aa22.75■■□□□ 1.23
DDX39A-215ENST00000590696 RNF139Q8WU17 664 aa22.75■■□□□ 1.23
DDX39A-215ENST00000590696 EDEM1Q92611 657 aa22.75■■□□□ 1.23
DDX39A-215ENST00000590696 ERCC4Q92889 916 aaPredicted RBP22.75■■□□□ 1.23
DDX39A-215ENST00000590696 IPO9Q96P70 1041 aaKnown RBP22.75■■□□□ 1.23
DDX39A-215ENST00000590696 CIPCQ9C0C6 399 aa22.75■■□□□ 1.23
DDX39A-215ENST00000590696 SUSD2Q9UGT4 822 aa22.75■■□□□ 1.23
DDX39A-215ENST00000590696 ARMCX3Q9UH62 379 aaPredicted RBP22.75■■□□□ 1.23
DDX39A-215ENST00000590696 SFMBT1Q9UHJ3 866 aa22.75■■□□□ 1.23
DDX39A-215ENST00000590696 CEP295Q9C0D2 2601 aa22.74■■□□□ 1.23
DDX39A-215ENST00000590696 KCNJ18B7U540 433 aa22.74■■□□□ 1.23
DDX39A-215ENST00000590696 TSPAN3O60637 253 aa22.74■■□□□ 1.23
DDX39A-215ENST00000590696 VDRP11473 427 aa22.74■■□□□ 1.23
DDX39A-215ENST00000590696 GNSP15586 552 aa22.74■■□□□ 1.23
DDX39A-215ENST00000590696 HARS2P49590 506 aaKnown RBP22.74■■□□□ 1.23
DDX39A-215ENST00000590696 SIM1P81133 766 aaPredicted RBP22.74■■□□□ 1.23
DDX39A-215ENST00000590696 EIF4HQ15056 248 aaKnown RBP22.74■■□□□ 1.23
DDX39A-215ENST00000590696 E2F5Q15329 346 aa22.74■■□□□ 1.23
DDX39A-215ENST00000590696 MPPE1Q53F39 396 aa22.74■■□□□ 1.23
DDX39A-215ENST00000590696 BSPRYQ5W0U4 402 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms