RNA–Protein interactions for RNA: ENST00000590523.1

LINC00662-206, long intergenic non-protein coding RNA 662, humanhuman

TSL 1 (best) BASIC

Gene LINC00662, Length 2,053 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-206ENST00000590523 TEX44Q53QW1 395 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 NCAPG2Q86XI2 1143 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
LINC00662-206ENST00000590523 PQLC3Q8N755 202 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 EBNA1BP2Q99848 306 aaKnown RBP13.19□□□□□ -0.3
LINC00662-206ENST00000590523 NT5C1AQ9BXI3 368 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 UBE2OQ9C0C9 1292 aaKnown RBP13.19□□□□□ -0.3
LINC00662-206ENST00000590523 SPATC1LQ9H0A9 340 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 C1orf21Q9H246 121 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 PRDM16Q9HAZ2 1276 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 NDUFA13Q9P0J0 144 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 HMGXB4Q9UGU5 601 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 B2RBV5 119 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 E5RJQ4 531 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 B4GALT5O43286 388 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 SNNO75324 88 aaPredicted RBP13.19□□□□□ -0.3
LINC00662-206ENST00000590523 TBX10O75333 385 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 KRT36O76013 467 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 BPGMP07738 259 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 PIM1P11309 404 aaPredicted RBP13.19□□□□□ -0.3
LINC00662-206ENST00000590523 IL4RP24394 825 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 SESN3P58005 492 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 MRPS5P82675 430 aaKnown RBP13.19□□□□□ -0.3
LINC00662-206ENST00000590523 ORC1Q13415 861 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 NAB1Q13506 487 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 TMEM132DQ14C87 1099 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 CHI3L2Q15782 390 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 CCDC14Q49A88 953 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 LIN52Q52LA3 116 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 RASIP1Q5U651 963 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 EFCAB12Q6NXP0 572 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 CDHR3Q6ZTQ4 885 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 NME8Q8N427 588 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 UBA3Q8TBC4 463 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 THAP1Q9NVV9 213 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 PPARGC1AQ9UBK2 798 aaKnown RBP13.19□□□□□ -0.3
LINC00662-206ENST00000590523 TSPAN16Q9UKR8 245 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 PCDHA11Q9Y5I1 949 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 HEY1Q9Y5J3 304 aa13.19□□□□□ -0.3
LINC00662-206ENST00000590523 A0A1B0GVG6 124 aa13.18□□□□□ -0.3
LINC00662-206ENST00000590523 GPR25O00155 361 aa13.18□□□□□ -0.3
LINC00662-206ENST00000590523 ITGBL1O95965 494 aaPredicted RBP13.18□□□□□ -0.3
LINC00662-206ENST00000590523 SERPINA6P08185 405 aa13.18□□□□□ -0.3
LINC00662-206ENST00000590523 NDST1P52848 882 aa13.18□□□□□ -0.3
LINC00662-206ENST00000590523 DSG1Q02413 1049 aa13.18□□□□□ -0.3
LINC00662-206ENST00000590523 C15orf59Q2T9L4 293 aaPredicted RBP13.18□□□□□ -0.3
LINC00662-206ENST00000590523 UNC5AQ6ZN44 842 aa13.18□□□□□ -0.3
LINC00662-206ENST00000590523 ARID3BQ8IVW6 561 aaPredicted RBP13.18□□□□□ -0.3
LINC00662-206ENST00000590523 ST13P4Q8IZP2 240 aaPredicted RBP13.18□□□□□ -0.3
LINC00662-206ENST00000590523 PCDH19Q8TAB3 1148 aa13.18□□□□□ -0.3
LINC00662-206ENST00000590523 PPP1R14BQ96C90 147 aa13.18□□□□□ -0.3
LINC00662-206ENST00000590523 ACAP3Q96P50 834 aa13.18□□□□□ -0.3
LINC00662-206ENST00000590523 SYT17Q9BSW7 474 aa13.18□□□□□ -0.3
LINC00662-206ENST00000590523 EPB41L1Q9H4G0 881 aa13.18□□□□□ -0.3
LINC00662-206ENST00000590523 BTBD7Q9P203 1132 aa13.18□□□□□ -0.3
LINC00662-206ENST00000590523 PTPRFP10586 1907 aa13.18□□□□□ -0.3
LINC00662-206ENST00000590523 CXorf49A8MYA2 514 aaPredicted RBP13.17□□□□□ -0.3
LINC00662-206ENST00000590523 ZSCAN9O15535 394 aaPredicted RBP13.17□□□□□ -0.3
LINC00662-206ENST00000590523 TM7SF2O76062 418 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 SLC25A27O95847 323 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 PABPC4LP0CB38 370 aaKnown RBP13.17□□□□□ -0.3
LINC00662-206ENST00000590523 MLNP12872 115 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 NRLP54845 237 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 RPL26P61254 145 aaKnown RBP13.17□□□□□ -0.3
LINC00662-206ENST00000590523 SLC6A3Q01959 620 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 STX3Q13277 289 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 MAP7Q14244 749 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 CDO1Q16878 200 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 ZNF484Q5JVG2 852 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 SH3PXD2AQ5TCZ1 1133 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 TRNP1Q6NT89 227 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 SCYL2Q6P3W7 929 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 TTC7BQ86TV6 843 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 ALYREFQ86V81 257 aaKnown RBP13.17□□□□□ -0.3
LINC00662-206ENST00000590523 CCNJLQ8IV13 435 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 SCUBE1Q8IWY4 988 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 TMEM192Q8IY95 271 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 NDUFAF2Q8N183 169 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 FAM172AQ8WUF8 416 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 SIGLEC10Q96LC7 697 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 SPATA33Q96N06 139 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 SLC4A5Q9BY07 1137 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 NRDE2Q9H7Z3 1164 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 GPAMQ9HCL2 828 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 NGRNQ9NPE2 291 aaKnown RBP13.17□□□□□ -0.3
LINC00662-206ENST00000590523 ARHGEF4Q9NR80 690 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 KRT82Q9NSB4 513 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 HBS1LQ9Y450 684 aaKnown RBP13.17□□□□□ -0.3
LINC00662-206ENST00000590523 GJA3Q9Y6H8 435 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 RPS6KL1Q9Y6S9 549 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 SMIM31A0A1B0GVY4 71 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 CRABP2P29373 138 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 THOC5Q13769 683 aaKnown RBP13.17□□□□□ -0.3
LINC00662-206ENST00000590523 MYBPC3Q14896 1274 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 HSDL1Q3SXM5 330 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 OLFML1Q6UWY5 402 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 MARK2Q7KZI7 788 aaKnown RBP13.17□□□□□ -0.3
LINC00662-206ENST00000590523 TRIM50Q86XT4 487 aa13.17□□□□□ -0.3
LINC00662-206ENST00000590523 WDR75Q8IWA0 830 aaKnown RBP13.17□□□□□ -0.3
LINC00662-206ENST00000590523 HACE1Q8IYU2 909 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms