RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 STILQ15468 1287 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 MEA1Q16626 185 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 VWA3BQ502W6 1294 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 HSP90AA4PQ58FG1 418 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 CCDC183Q5T5S1 534 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 CDKAL1Q5VV42 579 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 RHBDF2Q6PJF5 856 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 C11orf57Q6ZUT1 292 aaPredicted RBP11.76□□□□□ -0.53
SMAD4-211ENST00000590499 CREBRFQ8IUR6 639 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 BBS7Q8IWZ6 715 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 SPEM1Q8N4L4 309 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 SHC3Q92529 594 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 NDRG1Q92597 394 aaKnown RBP11.76□□□□□ -0.53
SMAD4-211ENST00000590499 SECISBP2LQ93073 1101 aaKnown RBP11.76□□□□□ -0.53
SMAD4-211ENST00000590499 OTUB2Q96DC9 234 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 FAM81BQ96LP2 452 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 P2RY13Q9BPV8 354 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 ULBP1Q9BZM6 244 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 NACA2Q9H009 215 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 NDST4Q9H3R1 872 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 C2orf42Q9NWW7 574 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 TBC1D14Q9P2M4 693 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 NAGPAQ9UK23 515 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 NUDT5Q9UKK9 219 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 NFE2L3Q9Y4A8 694 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 M0QYV0 167 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 ZBED1O96006 694 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 EGFP01133 1207 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 KRT5P13647 590 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 DRD1P21728 446 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 EEF1GP26641 437 aaKnown RBP11.75□□□□□ -0.53
SMAD4-211ENST00000590499 CCR3P51677 355 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 MFAP3P55082 362 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 YWHAGP61981 247 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMAD4-211ENST00000590499 RELBQ01201 579 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 ADIGQ0VDE8 80 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 GRSF1Q12849 480 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMAD4-211ENST00000590499 NR1H3Q13133 447 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 TCP11X2Q5H9J9 407 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 C10orf120Q5SQS8 335 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 PMF1Q6P1K2 205 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 PKN3Q6P5Z2 889 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 HTR3DQ70Z44 454 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 TADA2BQ86TJ2 420 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 ARHGAP18Q8N392 663 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 CD101Q93033 1021 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 CDK5RAP1Q96SZ6 601 aaKnown RBP11.75□□□□□ -0.53
SMAD4-211ENST00000590499 LRRC4Q9HBW1 653 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 ACP6Q9NPH0 428 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 CNGB3Q9NQW8 809 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 TMEM63CQ9P1W3 806 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 SH3BP1Q9Y3L3 701 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 PCDHB9Q9Y5E1 797 aa11.75□□□□□ -0.53
SMAD4-211ENST00000590499 YJEFN3A6XGL0 299 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 E7ENQ6 273 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 K7ESF4 209 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 HOXC11O43248 304 aaPredicted RBP11.74□□□□□ -0.53
SMAD4-211ENST00000590499 STC2O76061 302 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 IRF1P10914 325 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 RALAP11233 206 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 PRKCSHP14314 528 aaPredicted RBP11.74□□□□□ -0.53
SMAD4-211ENST00000590499 GPD2P43304 727 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 RGS7P49802 495 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 DAOAP59103 153 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 SATB1Q01826 763 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 CSTF1Q05048 431 aaKnown RBP11.74□□□□□ -0.53
SMAD4-211ENST00000590499 MESP2Q0VG99 397 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 STX1AQ16623 288 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 TSSK4Q6SA08 328 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 ALYREFQ86V81 257 aaKnown RBP11.74□□□□□ -0.53
SMAD4-211ENST00000590499 C12orf40Q86WS4 652 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 ETFBKMTQ8IXQ9 262 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 PHTF2Q8N3S3 785 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 ZBTB44Q8NCP5 570 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 ZNF606Q8WXB4 792 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 HSFY1Q96LI6 401 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 ANO10Q9NW15 660 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 R4GN57 208 aa11.74□□□□□ -0.53
SMAD4-211ENST00000590499 DMXL1Q9Y485 3027 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 SLC35F4A4IF30 521 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 PRR23AA6NEV1 266 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 CHURC1-FNTBB4DL54 471 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 LILRB5O75023 590 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 KLKB1P03952 638 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 ADH5P11766 374 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 GNA15P30679 374 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 EIF2DP41214 584 aaKnown RBP11.73□□□□□ -0.53
SMAD4-211ENST00000590499 CXCL12P48061 93 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 SLC6A11P48066 632 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 EML5Q05BV3 1969 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 GOLGA8FQ08AF8 430 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 GOLGA8DPQ0D2H9 430 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 EFEMP1Q12805 493 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 NCAPHQ15003 741 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 ARHGAP44Q17R89 818 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 FBXO43Q4G163 708 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 LY6G5CQ5SRR4 150 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 BSPRYQ5W0U4 402 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 DENND1BQ6P3S1 775 aa11.73□□□□□ -0.53
SMAD4-211ENST00000590499 SPAG17Q6Q759 2223 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms