RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 TUBP50607 506 aa22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 CENPCQ03188 943 aa22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 OR6B2Q6IFH4 312 aa22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 OLFML1Q6UWY5 402 aa22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 XYLT1Q86Y38 959 aa22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 YAF2Q8IY57 180 aa22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 IRGQQ8WZA9 623 aa22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 WBP2Q969T9 261 aa22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 ZFRQ96KR1 1074 aaKnown RBP22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 C11orf70Q9BRQ4 267 aa22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 SYNCQ9H7C4 482 aa22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 C8orf33Q9H7E9 229 aaPredicted RBP22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 GRPEL1Q9HAV7 217 aa22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 CLIC5Q9NZA1 410 aa22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 HELZP42694 1942 aaKnown RBP22.45■■□□□ 1.18
R3HDM4-206ENST00000590454 GOLGA6L3A6NEY3 463 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 SOBPA7XYQ1 873 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 HEPACAM2A8MVW5 462 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 K7ESF4 209 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 ARNTLO00327 626 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 GRAP2O75791 330 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 LTFP02788 710 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 TPM1P09493 284 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 PSEN1P49768 467 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 C10orf120Q5SQS8 335 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 BTBD8Q5XKL5 378 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 HEATR6Q6AI08 1181 aaKnown RBP22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 CEP68Q76N32 757 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 ARHGAP18Q8N392 663 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 FAM160A2Q8N612 972 aaPredicted RBP22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 SPC24Q8NBT2 197 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 TTC16Q8NEE8 873 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 IPO4Q8TEX9 1081 aaKnown RBP22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 C18orf8Q96DM3 657 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 CHP1Q99653 195 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 GKN1Q9NS71 199 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 TDP1Q9NUW8 608 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 CPQQ9Y646 472 aa22.44■■□□□ 1.18
R3HDM4-206ENST00000590454 MBL2P11226 248 aaPredicted RBP22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 CDC25BP30305 580 aa22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 EIF4A3P38919 411 aaKnown RBP22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 KPNA1P52294 538 aaPredicted RBP22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 LIMK1P53667 647 aa22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 SLC7A9P82251 487 aa22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 AASDHQ4L235 1098 aaPredicted RBP22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 DGKKQ5KSL6 1271 aa22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 ACAD10Q6JQN1 1059 aa22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 MON1BQ7L1V2 547 aa22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 DRC7Q8IY82 874 aa22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 FAM149B1Q96BN6 582 aa22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 RBM12Q9NTZ6 932 aaKnown RBP22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 ZMYM5Q9UJ78 669 aa22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 ARHGAP26Q9UNA1 814 aa22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 NAALADL1Q9UQQ1 740 aa22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 BZW2Q9Y6E2 419 aaKnown RBP22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 COL4A2P08572 1712 aa22.43■■□□□ 1.18
R3HDM4-206ENST00000590454 A0A087X0T9 212 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 GOLGA8SH3BPF8 625 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 SCAMP3O14828 347 aaKnown RBP22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 CHADO15335 359 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 GJB6O95452 261 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 FAM228BP0C875 321 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 RALAP11233 206 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 PFKLP17858 780 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 PMLP29590 882 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 ATP5C1P36542 298 aaKnown RBP22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 NSFP46459 744 aaKnown RBP22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 SLC6A3Q01959 620 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 EFEMP1Q12805 493 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 N4BP2L1Q5TBK1 243 aaPredicted RBP22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 SYPL2Q5VXT5 272 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 PHF13Q86YI8 300 aaPredicted RBP22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 CNGA4Q8IV77 575 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 SH3RF2Q8TEC5 729 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 KLF16Q9BXK1 252 aaPredicted RBP22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 ABCC13Q9NSE7 274 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 ADAM22Q9P0K1 906 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 ADAMTS1Q9UHI8 967 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 F5P12259 2224 aa22.42■■□□□ 1.18
R3HDM4-206ENST00000590454 HOXA6P31267 233 aa22.41■■□□□ 1.18
R3HDM4-206ENST00000590454 PITX1P78337 314 aaPredicted RBP22.41■■□□□ 1.18
R3HDM4-206ENST00000590454 ZNF268Q14587 947 aaPredicted RBP22.41■■□□□ 1.18
R3HDM4-206ENST00000590454 ZNF77Q15935 545 aa22.41■■□□□ 1.18
R3HDM4-206ENST00000590454 RSRC2Q7L4I2 434 aaKnown RBP22.41■■□□□ 1.18
R3HDM4-206ENST00000590454 MIB1Q86YT6 1006 aa22.41■■□□□ 1.18
R3HDM4-206ENST00000590454 ZNF276Q8N554 614 aa22.41■■□□□ 1.18
R3HDM4-206ENST00000590454 NACA2Q9H009 215 aa22.41■■□□□ 1.18
R3HDM4-206ENST00000590454 SFMBT1Q9UHJ3 866 aa22.41■■□□□ 1.18
R3HDM4-206ENST00000590454 RASAL2Q9UJF2 1139 aa22.41■■□□□ 1.18
R3HDM4-206ENST00000590454 DNMT3LQ9UJW3 386 aa22.41■■□□□ 1.18
R3HDM4-206ENST00000590454 MAP1BP46821 2468 aaKnown RBP22.41■■□□□ 1.18
R3HDM4-206ENST00000590454 LEFTY2O00292 366 aa22.4■■□□□ 1.18
R3HDM4-206ENST00000590454 DPYSL4O14531 572 aa22.4■■□□□ 1.18
R3HDM4-206ENST00000590454 SART1O43290 800 aaKnown RBP22.4■■□□□ 1.18
R3HDM4-206ENST00000590454 IRF1P10914 325 aa22.4■■□□□ 1.18
R3HDM4-206ENST00000590454 SOX9P48436 509 aa22.4■■□□□ 1.18
R3HDM4-206ENST00000590454 YWHAZP63104 245 aaKnown RBP22.4■■□□□ 1.18
R3HDM4-206ENST00000590454 SHC2P98077 582 aa22.4■■□□□ 1.18
R3HDM4-206ENST00000590454 FCHO2Q0JRZ9 810 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms