RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 BECN2A8MW95 431 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 H0Y858 1186 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 GRSF1Q12849 480 aaKnown RBP eCLIP10.86□□□□□ -0.67
SDF2-208ENST00000589788 TCF15Q12870 199 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 RAPGEF1Q13905 1077 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 ANGPT1Q15389 498 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 DGKKQ5KSL6 1271 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 BTBD8Q5XKL5 378 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 PM20D1Q6GTS8 502 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 TXNDC11Q6PKC3 985 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 MIB1Q86YT6 1006 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 ZNF276Q8N554 614 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 SLC35F5Q8WV83 523 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 ZNF606Q8WXB4 792 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 SCG3Q8WXD2 468 aaKnown RBP10.86□□□□□ -0.67
SDF2-208ENST00000589788 GOLGA1Q92805 767 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 ATOH1Q92858 354 aaPredicted RBP10.86□□□□□ -0.67
SDF2-208ENST00000589788 OTUB2Q96DC9 234 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 LSM14BQ9BX40 385 aaKnown RBP10.86□□□□□ -0.67
SDF2-208ENST00000589788 CBX8Q9HC52 389 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 CNGB3Q9NQW8 809 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 ST7Q9NRC1 585 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 RASAL2Q9UJF2 1139 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 LSM7Q9UK45 103 aaKnown RBP10.86□□□□□ -0.67
SDF2-208ENST00000589788 STRIP2Q9ULQ0 834 aa10.86□□□□□ -0.67
SDF2-208ENST00000589788 PIK3R2O00459 728 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 MDM4O15151 490 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 LAMTOR5O43504 91 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 FBXO21O94952 628 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 CHRNB1P11230 501 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 GJA4P35212 333 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 COPB1P53618 953 aaKnown RBP10.85□□□□□ -0.67
SDF2-208ENST00000589788 WDR4P57081 412 aaKnown RBP10.85□□□□□ -0.67
SDF2-208ENST00000589788 BPIFB4P59827 614 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 KCNMA1Q12791 1236 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 EFEMP1Q12805 493 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 IQCB1Q15051 598 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 MEA1Q16626 185 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 KLHDC7AQ5VTJ3 777 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 PMF1Q6P1K2 205 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 DENND1BQ6P3S1 775 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 C1orf210Q8IVY1 113 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 ADGRG2Q8IZP9 1017 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 SCML4Q8N228 414 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 RNF139Q8WU17 664 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 NDRG1Q92597 394 aaKnown RBP10.85□□□□□ -0.67
SDF2-208ENST00000589788 HSFY1Q96LI6 401 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 P2RY13Q9BPV8 354 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 IER2Q9BTL4 223 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 RBSNQ9H1K0 784 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 CHRDQ9H2X0 955 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 ACP6Q9NPH0 428 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 OLA1Q9NTK5 396 aaKnown RBP10.85□□□□□ -0.67
SDF2-208ENST00000589788 MARCH2Q9P0N8 246 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 LIMA1Q9UHB6 759 aaKnown RBP10.85□□□□□ -0.67
SDF2-208ENST00000589788 AJAP1Q9UKB5 411 aaPredicted RBP10.85□□□□□ -0.67
SDF2-208ENST00000589788 FHOD1Q9Y613 1164 aa10.85□□□□□ -0.67
SDF2-208ENST00000589788 TTC24A2A3L6 582 aaPredicted RBP10.84□□□□□ -0.67
SDF2-208ENST00000589788 A6NJY4 79 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 YJEFN3A6XGL0 299 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 SMTNL1A8MU46 457 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 E7ENQ6 273 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 FOXN3O00409 490 aaPredicted RBP10.84□□□□□ -0.67
SDF2-208ENST00000589788 TRDMT1O14717 391 aaKnown RBP10.84□□□□□ -0.67
SDF2-208ENST00000589788 SART1O43290 800 aaKnown RBP10.84□□□□□ -0.67
SDF2-208ENST00000589788 CYP17A1P05093 508 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 UCHL3P15374 230 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 KRT9P35527 623 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 PLA2G5P39877 138 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 GPD2P43304 727 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 ACADSBP45954 432 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 GALK1P51570 392 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 DAOAP59103 153 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 COG7P83436 770 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 PRR20EP86478 221 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 PRR20CP86479 221 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 PRR20DP86480 221 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 PRR20BP86481 221 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 PRR20AP86496 221 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 NHLH1Q02575 133 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 MTAPQ13126 283 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 CLN3Q13286 438 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 FZD5Q13467 585 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 DRAP1Q14919 205 aaPredicted RBP10.84□□□□□ -0.67
SDF2-208ENST00000589788 DHCR24Q15392 516 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 BSPRYQ5W0U4 402 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 BBS7Q8IWZ6 715 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 DHX40Q8IX18 779 aaKnown RBP10.84□□□□□ -0.67
SDF2-208ENST00000589788 CYP4X1Q8N118 509 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 IRGQQ8WZA9 623 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 CD101Q93033 1021 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 COL26A1Q96A83 441 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 CHFRQ96EP1 664 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 NOX5Q96PH1 765 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 MIS12Q9H081 205 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 PLCB1Q9NQ66 1216 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 ABCC13Q9NSE7 274 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 RBM12Q9NTZ6 932 aaKnown RBP10.84□□□□□ -0.67
SDF2-208ENST00000589788 EGFL7Q9UHF1 273 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 CEP83Q9Y592 693 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms