RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 ASMTLO95671 621 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 ASGR1P07306 291 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 APRTP07741 180 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 AMPD1P23109 780 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 YWHAGP61981 247 aaKnown RBP eCLIP15.8■□□□□ 0.12
MBD1-217ENST00000588937 UPP1Q16831 310 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 KIAA0319Q5VV43 1072 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 DENND1AQ8TEH3 1009 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 MRRFQ96E11 262 aaKnown RBP15.8■□□□□ 0.12
MBD1-217ENST00000588937 SMARCD1Q96GM5 515 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 PCED1BQ96HM7 432 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 FGFR1OP2Q9NVK5 253 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 DTLQ9NZJ0 730 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 PADI3Q9ULW8 664 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 TRDMT1O14717 391 aaKnown RBP15.8■□□□□ 0.12
MBD1-217ENST00000588937 DGKIO75912 1065 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 CA4P22748 312 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 FDFT1P37268 417 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 DAOAP59103 153 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 ACTN3Q08043 901 aaPredicted RBP15.8■□□□□ 0.12
MBD1-217ENST00000588937 SLC10A2Q12908 348 aaPredicted RBP15.8■□□□□ 0.12
MBD1-217ENST00000588937 SEPT7Q16181 437 aaKnown RBP15.8■□□□□ 0.12
MBD1-217ENST00000588937 KCNA10Q16322 511 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 RAB41Q5JT25 222 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 PDZD4Q76G19 769 aaPredicted RBP15.8■□□□□ 0.12
MBD1-217ENST00000588937 PCSK9Q8NBP7 692 aaKnown RBP15.8■□□□□ 0.12
MBD1-217ENST00000588937 KLHDC9Q8NEP7 349 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 PXYLP1Q8TE99 480 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 RNF139Q8WU17 664 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 DCAKDQ8WVC6 231 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 HTR3CQ8WXA8 447 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 CCT6BQ92526 530 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 NDRG1Q92597 394 aaKnown RBP15.8■□□□□ 0.12
MBD1-217ENST00000588937 NTAN1Q96AB6 310 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 OLFM3Q96PB7 478 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 PAIP2Q9BPZ3 127 aaKnown RBP15.8■□□□□ 0.12
MBD1-217ENST00000588937 OSBPL7Q9BZF2 842 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 ULBP1Q9BZM6 244 aa15.8■□□□□ 0.12
MBD1-217ENST00000588937 AGO3Q9H9G7 860 aaKnown RBP15.8■□□□□ 0.12
MBD1-217ENST00000588937 XAB2Q9HCS7 855 aaKnown RBP15.8■□□□□ 0.12
MBD1-217ENST00000588937 TCRBV9S1A1TA0A576 114 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 MYBPHLA2RUH7 354 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 CASTOR2A6NHX0 329 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 H0YHG0 523 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 TYROBPO43914 113 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 MAP3K6O95382 1288 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 OAS1P00973 400 aaKnown RBP15.79■□□□□ 0.12
MBD1-217ENST00000588937 INHBAP08476 426 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 KRT4P19013 534 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 CST5P28325 142 aaPredicted RBP15.79■□□□□ 0.12
MBD1-217ENST00000588937 CD52P31358 61 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 NDUFV1P49821 464 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 PRMT2P55345 433 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 CDK16Q00536 496 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 CACNB2Q08289 660 aaPredicted RBP15.79■□□□□ 0.12
MBD1-217ENST00000588937 GRIK3Q13003 919 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 PDK1Q15118 436 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 MAP3K21Q5TCX8 1036 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 RGS9BPQ6ZS82 235 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 C4orf33Q8N1A6 199 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 SLC44A1Q8WWI5 657 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 PGAP3Q96FM1 320 aaPredicted RBP15.79■□□□□ 0.12
MBD1-217ENST00000588937 UROC1Q96N76 676 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 SMOQ99835 787 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 ARHGEF4Q9NR80 690 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 ZC3H7BQ9UGR2 993 aaKnown RBP15.79■□□□□ 0.12
MBD1-217ENST00000588937 RAD54BQ9Y620 910 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 CAPN7Q9Y6W3 813 aa15.79■□□□□ 0.12
MBD1-217ENST00000588937 TSC2P49815 1807 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 A0A0A0MRY4 1105 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 A0A0U1RQF3 1178 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 PPP1R12AO14974 1030 aaPredicted RBP15.78■□□□□ 0.12
MBD1-217ENST00000588937 TM9SF1O15321 606 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 F9P00740 461 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 TAC1P20366 129 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 ZNF135P52742 658 aaPredicted RBP15.78■□□□□ 0.12
MBD1-217ENST00000588937 WDR4P57081 412 aaKnown RBP15.78■□□□□ 0.12
MBD1-217ENST00000588937 NME3Q13232 169 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 PTK7Q13308 1070 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 SEMA5AQ13591 1074 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 DSC3Q14574 896 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 EFTUD2Q15029 972 aaKnown RBP eCLIP15.78■□□□□ 0.121e-6■■■■■ 42
MBD1-217ENST00000588937 ARHGEF6Q15052 776 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 ARL13BQ3SXY8 428 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 LGSNQ5TDP6 509 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 HHATQ5VTY9 493 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 OTUD1Q5VV17 481 aaPredicted RBP15.78■□□□□ 0.12
MBD1-217ENST00000588937 SPATA21Q7Z572 469 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 CAND1Q86VP6 1230 aaKnown RBP15.78■□□□□ 0.12
MBD1-217ENST00000588937 IGDCC3Q8IVU1 814 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 PYROXD2Q8N2H3 581 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 SLC7A14Q8TBB6 771 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 IRGQQ8WZA9 623 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 SPATA13Q96N96 652 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 ACBD6Q9BR61 282 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 SQORQ9Y6N5 450 aa15.78■□□□□ 0.12
MBD1-217ENST00000588937 SYNJ2BP-COX16A0A087WUM0 186 aa15.77■□□□□ 0.12
MBD1-217ENST00000588937 A0A1W2PPM1 405 aa15.77■□□□□ 0.12
MBD1-217ENST00000588937 EEF2KO00418 725 aaKnown RBP15.77■□□□□ 0.12
MBD1-217ENST00000588937 CABYRO75952 493 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms