RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 KCNJ1P48048 391 aa27.02■■□□□ 1.92
SCAMP4-210ENST00000588555 DYNLT1P63172 113 aa27.02■■□□□ 1.92
SCAMP4-210ENST00000588555 DR1Q01658 176 aa27.02■■□□□ 1.92
SCAMP4-210ENST00000588555 TWF1Q12792 350 aa27.02■■□□□ 1.92
SCAMP4-210ENST00000588555 EFHC2Q5JST6 749 aa27.02■■□□□ 1.92
SCAMP4-210ENST00000588555 RUBCNQ92622 972 aa27.02■■□□□ 1.92
SCAMP4-210ENST00000588555 TRMT2BQ96GJ1 504 aaKnown RBP27.02■■□□□ 1.92
SCAMP4-210ENST00000588555 SERPINB11Q96P15 392 aa27.02■■□□□ 1.92
SCAMP4-210ENST00000588555 HINFPQ9BQA5 517 aa27.02■■□□□ 1.92
SCAMP4-210ENST00000588555 CWC15Q9P013 229 aaKnown RBP27.02■■□□□ 1.92
SCAMP4-210ENST00000588555 RCOR3Q9P2K3 495 aaPredicted RBP27.02■■□□□ 1.92
SCAMP4-210ENST00000588555 PCDHA11Q9Y5I1 949 aa27.02■■□□□ 1.92
SCAMP4-210ENST00000588555 ZSCAN5CA6NGD5 496 aaPredicted RBP27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 SPATA31D3P0C874 917 aa27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 SEMA3BQ13214 749 aa27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 SNX1Q13596 522 aa27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 SNX30Q5VWJ9 437 aa27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 PLPP4Q5VZY2 271 aa27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 SPATA31D4Q6ZUB0 917 aa27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 SLCO2A1Q92959 643 aa27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 RUNDC3BQ96NL0 473 aa27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 CSPG4P5Q96PW8 444 aa27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 EMILIN2Q9BXX0 1053 aa27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 TKTL2Q9H0I9 626 aa27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 ARHGEF38Q9NXL2 777 aa27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 YBX2Q9Y2T7 364 aaKnown RBP27.01■■□□□ 1.91
SCAMP4-210ENST00000588555 TRANK1O15050 2925 aa27■■□□□ 1.91
SCAMP4-210ENST00000588555 APOC4-APOC2K7ER74 178 aa27■■□□□ 1.91
SCAMP4-210ENST00000588555 GRM6O15303 877 aa27■■□□□ 1.91
SCAMP4-210ENST00000588555 LIASO43766 372 aa27■■□□□ 1.91
SCAMP4-210ENST00000588555 APOC2P02655 101 aa27■■□□□ 1.91
SCAMP4-210ENST00000588555 TUBBP07437 444 aa27■■□□□ 1.91
SCAMP4-210ENST00000588555 TFDP2Q14188 446 aa27■■□□□ 1.91
SCAMP4-210ENST00000588555 KCTD19Q17RG1 926 aaPredicted RBP27■■□□□ 1.91
SCAMP4-210ENST00000588555 ARL13BQ3SXY8 428 aa27■■□□□ 1.91
SCAMP4-210ENST00000588555 SLC9A4Q6AI14 798 aa27■■□□□ 1.91
SCAMP4-210ENST00000588555 DRICH1Q6PGQ1 229 aaPredicted RBP27■■□□□ 1.91
SCAMP4-210ENST00000588555 HAUS1Q96CS2 278 aa27■■□□□ 1.91
SCAMP4-210ENST00000588555 SAE1Q9UBE0 346 aaPredicted RBP27■■□□□ 1.91
SCAMP4-210ENST00000588555 TBX18O95935 607 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 GOT1P17174 413 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 VEPH1Q14D04 833 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 BRMS1LQ5PSV4 323 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 FBXO38Q6PIJ6 1188 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 JAMLQ86YT9 394 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 CCDC105Q8IYK2 499 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 ZNF276Q8N554 614 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 PLD5Q8N7P1 536 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 PDZD8Q8NEN9 1154 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 GDF15Q99988 308 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 MAK16Q9BXY0 300 aaKnown RBP26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 OLA1Q9NTK5 396 aaKnown RBP26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 ERVK-21P61565 698 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 PPP2R5DQ14738 602 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 TTC13Q8NBP0 860 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 SLC35B2Q8TB61 432 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 ACTL9Q8TC94 416 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 PSMG2Q969U7 264 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 SLC39A13Q96H72 371 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 SAMD11Q96NU1 681 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 TGS1Q96RS0 853 aaKnown RBP26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 CCSER2Q9H7U1 834 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 GDF3Q9NR23 364 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 TMEM51Q9NW97 253 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 DNPEPQ9ULA0 475 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 TLR6Q9Y2C9 796 aa26.99■■□□□ 1.91
SCAMP4-210ENST00000588555 FAM187AA6NFU0 413 aa26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 FAM72CH0Y354 149 aa26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 PECAM1P16284 738 aaPredicted RBP26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 KLRC2P26717 231 aa26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 CCR1P32246 355 aa26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 EPHB3P54753 998 aa26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 OTUD4Q01804 1114 aaKnown RBP26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 GUCY2DQ02846 1103 aa26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 NNTQ13423 1086 aa26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 FAM72AQ5TYM5 149 aa26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 FAM72DQ6L9T8 149 aa26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 DNAJB7Q7Z6W7 309 aaPredicted RBP26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 FAM72BQ86X60 149 aa26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 NKD2Q969F2 451 aaPredicted RBP26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 TRIM51Q9BSJ1 452 aa26.98■■□□□ 1.91
SCAMP4-210ENST00000588555 ZNF840PA6NDX5 716 aa26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 TLR5O60602 858 aa26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 CSPG5O95196 566 aa26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 IRS1P35568 1242 aa26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 PBX2P40425 430 aa26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 ARL4AP40617 200 aa26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 EFEMP1Q12805 493 aa26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 OASLQ15646 514 aaKnown RBP26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 SEC14L1Q92503 715 aa26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 RNF34Q969K3 372 aa26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 ZNF512Q96ME7 567 aaPredicted RBP26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 FRMD8P1Q9BZ68 369 aaPredicted RBP26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 EPB41L5Q9HCM4 733 aa26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 KCNU1A8MYU2 1149 aa26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 PLD1Q13393 1074 aa26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 BYSLQ13895 437 aaKnown RBP26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 C10orf120Q5SQS8 335 aa26.97■■□□□ 1.91
SCAMP4-210ENST00000588555 ATL2Q8NHH9 583 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms