RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 CDH6P55285 790 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 TBX4P57082 545 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 ADCY2Q08462 1091 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 C2orf54Q08AI8 447 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 SCAPQ12770 1279 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 KCNC3Q14003 757 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 DPYSL3Q14195 570 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 KRT81Q14533 505 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 SIX1Q15475 284 aaPredicted RBP11.74□□□□□ -0.53
VMP1-207ENST00000588131 TRIP4Q15650 581 aaPredicted RBP11.74□□□□□ -0.53
VMP1-207ENST00000588131 DPYSL2Q16555 572 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 TAZQ16635 292 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 LRIT3Q3SXY7 679 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 HECTD3Q5T447 861 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 GAREM2Q75VX8 874 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 SND1Q7KZF4 910 aaKnown RBP eCLIP11.74□□□□□ -0.53
VMP1-207ENST00000588131 ZNF572Q7Z3I7 529 aaPredicted RBP11.74□□□□□ -0.53
VMP1-207ENST00000588131 MIB1Q86YT6 1006 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 ZNF276Q8N554 614 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 C12orf76Q8N812 135 aaPredicted RBP11.74□□□□□ -0.53
VMP1-207ENST00000588131 CEP112Q8N8E3 955 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 KCTD6Q8NC69 237 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 FAM71BQ8TC56 605 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 RNF34Q969K3 372 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 ZNF707Q96C28 371 aaPredicted RBP11.74□□□□□ -0.53
VMP1-207ENST00000588131 SLC39A13Q96H72 371 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 HEMGNQ9BXL5 484 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 AP1M1Q9BXS5 423 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 CALN1Q9BXU9 219 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 OSBPL8Q9BZF1 889 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 TKTL2Q9H0I9 626 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 WDCPQ9H6R7 721 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 ARHGEF38Q9NXL2 777 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 MARCH2Q9P0N8 246 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 DNMT3BQ9UBC3 853 aaKnown RBP11.74□□□□□ -0.53
VMP1-207ENST00000588131 RNF14Q9UBS8 474 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 TLR6Q9Y2C9 796 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 NR2E1Q9Y466 385 aa11.74□□□□□ -0.53
VMP1-207ENST00000588131 A0A1W2PRU2 124 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 MOSPD3O75425 235 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 IGLV3-27P01718 113 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 HMBSP08397 361 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 HNRNPA1P09651 372 aaKnown RBP eCLIP11.73□□□□□ -0.53
VMP1-207ENST00000588131 PTPN2P17706 415 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 IL4RP24394 825 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 CCR1P32246 355 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 PTPN7P35236 360 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 ATP5C1P36542 298 aaKnown RBP11.73□□□□□ -0.53
VMP1-207ENST00000588131 GGCXP38435 758 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 EPHA5P54756 1037 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 COPS2P61201 443 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 NTHL1P78549 312 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 HYAL1Q12794 435 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 KLF1Q13351 362 aaPredicted RBP11.73□□□□□ -0.53
VMP1-207ENST00000588131 NNTQ13423 1086 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 PPP2R5DQ14738 602 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 PDK2Q15119 407 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 PPP2R5EQ16537 467 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 ODF2Q5BJF6 829 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 TCEAL5Q5H9L2 206 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 PPP6R3Q5H9R7 873 aaPredicted RBP11.73□□□□□ -0.53
VMP1-207ENST00000588131 EFHC2Q5JST6 749 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 BRMS1LQ5PSV4 323 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 DENND4CQ5VZ89 1909 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 KAZNQ674X7 775 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 TXNDC8Q6A555 127 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 PSTKQ8IV42 348 aaKnown RBP11.73□□□□□ -0.53
VMP1-207ENST00000588131 SPATA4Q8NEY3 305 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 TSC1Q92574 1164 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 SLC22A12Q96S37 553 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 CDK5RAP1Q96SZ6 601 aaKnown RBP11.73□□□□□ -0.53
VMP1-207ENST00000588131 RNF38Q9H0F5 515 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 TTYH1Q9H313 450 aaPredicted RBP11.73□□□□□ -0.53
VMP1-207ENST00000588131 PRDM12Q9H4Q4 367 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 NSUN3Q9H649 340 aaKnown RBP11.73□□□□□ -0.53
VMP1-207ENST00000588131 IGFLR1Q9H665 355 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 TRPC7Q9HCX4 862 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 ASAH2Q9NR71 780 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 ZDHHC7Q9NXF8 308 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 XPO7Q9UIA9 1087 aaKnown RBP11.73□□□□□ -0.53
VMP1-207ENST00000588131 DNMT3LQ9UJW3 386 aa11.73□□□□□ -0.53
VMP1-207ENST00000588131 CCDC195A0A1B0GUA6 201 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 A0A1W2PPC1 479 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 CTAGE15A4D2H0 777 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 KCNU1A8MYU2 1149 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 FAM72CH0Y354 149 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 KRIT1O00522 736 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 LINC01565O15544 149 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 PAGE1O75459 146 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 GLP2RO95838 553 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 OLFM2O95897 454 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 MOCS2O96007 188 aaPredicted RBP11.72□□□□□ -0.53
VMP1-207ENST00000588131 RHOP08100 348 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 POU2F2P09086 479 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 CTAGE8P0CG41 777 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 CDC25CP30307 473 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 KCNQ1P51787 676 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 AIF1P55008 147 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 SEMA3BQ13214 749 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms