RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 CCDC186Q7Z3E2 898 aa12.2□□□□□ -0.46
LIG3-207ENST00000586119 RAB44Q7Z6P3 723 aaPredicted RBP12.2□□□□□ -0.46
LIG3-207ENST00000586119 MARCH9Q86YJ5 346 aa12.2□□□□□ -0.46
LIG3-207ENST00000586119 TMPRSS6Q8IU80 811 aa12.2□□□□□ -0.46
LIG3-207ENST00000586119 ZCCHC9Q8N567 271 aaKnown RBP12.2□□□□□ -0.46
LIG3-207ENST00000586119 SLC4A11Q8NBS3 891 aa12.2□□□□□ -0.46
LIG3-207ENST00000586119 RBBP8NLQ8NC74 664 aaPredicted RBP12.2□□□□□ -0.46
LIG3-207ENST00000586119 ARID3AQ99856 593 aa12.2□□□□□ -0.46
LIG3-207ENST00000586119 MIR1-1HGQ9H1L0 117 aa12.2□□□□□ -0.46
LIG3-207ENST00000586119 CYP3A43Q9HB55 503 aa12.2□□□□□ -0.46
LIG3-207ENST00000586119 HPSEQ9Y251 543 aa12.2□□□□□ -0.46
LIG3-207ENST00000586119 PKD1L2Q7Z442 2459 aa12.2□□□□□ -0.46
LIG3-207ENST00000586119 FAM221BA6H8Z2 402 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 TMEM8BA6NDV4 472 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 TSPAN3O60637 253 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 RALAP11233 206 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 NCAM1P13591 858 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 HLA-EP13747 358 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 TPMTP51580 245 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 COPAP53621 1224 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 RAD23BP54727 409 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 ENPP2Q13822 863 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 ZNF234Q14588 700 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 DCAF12L1Q5VU92 463 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 C19orf48Q6RUI8 117 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 FAM124AQ86V42 546 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 PIGZQ86VD9 579 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 FAM186BQ8IYM0 893 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 ZNF366Q8N895 744 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 DNASE2BQ8WZ79 361 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 NIF3L1Q9GZT8 377 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 USP36Q9P275 1121 aaKnown RBP12.19□□□□□ -0.46
LIG3-207ENST00000586119 SFMBT1Q9UHJ3 866 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 SLC27A6Q9Y2P4 619 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 ZDHHC9Q9Y397 364 aa12.19□□□□□ -0.46
LIG3-207ENST00000586119 BAHCC1Q9P281 2608 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 METTL12A8MUP2 240 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 MEI4A8MW99 385 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 KCNK3O14649 394 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 CBFA2T3O75081 653 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 FTH1P19P0C7X4 201 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 CMA1P23946 247 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 NDUFA8P51970 172 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 COG7P83436 770 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 SCAPQ12770 1279 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 DPYDQ12882 1025 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 ADAM9Q13443 819 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 SYCP2LQ5T4T6 812 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 BHLHA9Q7RTU4 235 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 METTL3Q86U44 580 aaKnown RBP12.18□□□□□ -0.46
LIG3-207ENST00000586119 NAXDQ8IW45 347 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 SMYD4Q8IYR2 804 aaPredicted RBP12.18□□□□□ -0.46
LIG3-207ENST00000586119 ZNF276Q8N554 614 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 CYB5D2Q8WUJ1 264 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 FOXJ1Q92949 421 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 SIPA1Q96FS4 1042 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 TMEM176AQ96HP8 235 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 ULBP1Q9BZM6 244 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 CIPCQ9C0C6 399 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 FAM124BQ9H5Z6 455 aaPredicted RBP12.18□□□□□ -0.46
LIG3-207ENST00000586119 TMEM8AQ9HCN3 771 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 PNPLA8Q9NP80 782 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 CISHQ9NSE2 258 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 ELOVL2Q9NXB9 296 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 CLIC5Q9NZA1 410 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 CHMP5Q9NZZ3 219 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 MARCH2Q9P0N8 246 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 EIF2B4Q9UI10 523 aaKnown RBP12.18□□□□□ -0.46
LIG3-207ENST00000586119 CFAP45Q9UL16 551 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 LHX6Q9UPM6 363 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 PCDHB9Q9Y5E1 797 aa12.18□□□□□ -0.46
LIG3-207ENST00000586119 ATRXP46100 2492 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 A0A1B0GTW7 788 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 A0A1B0GVT2 93 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 MAPK13O15264 365 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 RHOBTB3O94955 611 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 EPHX1P07099 455 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 GNSP15586 552 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 CHKAP35790 457 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 PSEN1P49768 467 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 SGSHP51688 502 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 TKTL1P51854 596 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 YWHAGP61981 247 aaKnown RBP eCLIP12.17□□□□□ -0.46
LIG3-207ENST00000586119 STARD3Q14849 445 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 RAB41Q5JT25 222 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 WDR45BQ5MNZ6 344 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 INTS8Q75QN2 995 aaKnown RBP12.17□□□□□ -0.46
LIG3-207ENST00000586119 RABEPKQ7Z6M1 372 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 ZC3H3Q8IXZ2 948 aaKnown RBP12.17□□□□□ -0.46
LIG3-207ENST00000586119 C1orf216Q8TAB5 229 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 UBA3Q8TBC4 463 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 SETD7Q8WTS6 366 aaKnown RBP12.17□□□□□ -0.46
LIG3-207ENST00000586119 DDI1Q8WTU0 396 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 ADAMTS14Q8WXS8 1223 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 EDEM1Q92611 657 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 MTG2Q9H4K7 406 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 GAREM1Q9H706 876 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 FNDC3AQ9Y2H6 1198 aaKnown RBP12.17□□□□□ -0.46
LIG3-207ENST00000586119 ZNF510Q9Y2H8 683 aa12.17□□□□□ -0.46
LIG3-207ENST00000586119 DSPP15924 2871 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms