RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 GKN1Q9NS71 199 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 TAS2R14Q9NYV8 317 aa14.45□□□□□ -0.1
TRAF4-215ENST00000584944 CNOT8Q9UFF9 292 aaKnown RBP14.45□□□□□ -0.1
TRAF4-215ENST00000584944 M0QYT0 321 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 STK25O00506 426 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 CHADO15335 359 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 MSI1O43347 362 aaKnown RBP14.44□□□□□ -0.1
TRAF4-215ENST00000584944 NFATC1O95644 943 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 TRUB2O95900 331 aaKnown RBP14.44□□□□□ -0.1
TRAF4-215ENST00000584944 F9P00740 461 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 PDGFRAP16234 1089 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 RRM1P23921 792 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 FCARP24071 287 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 MAPK8IP2Q13387 824 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-215ENST00000584944 ARID5BQ14865 1188 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 TRIP4Q15650 581 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-215ENST00000584944 MSANTD2Q6P1R3 559 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 WDR59Q6PJI9 974 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 BHLHA9Q7RTU4 235 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 ASCL5Q7RTU5 278 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 CCDC170Q8IYT3 715 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 TXLNBQ8N3L3 684 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 MCEEQ96PE7 176 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 DDX50Q9BQ39 737 aaKnown RBP14.44□□□□□ -0.1
TRAF4-215ENST00000584944 SYT11Q9BT88 431 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 RPP25Q9BUL9 199 aaKnown RBP14.44□□□□□ -0.1
TRAF4-215ENST00000584944 TLR6Q9Y2C9 796 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 GREB1Q4ZG55 1949 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 DOCK6Q96HP0 2047 aa14.44□□□□□ -0.1
TRAF4-215ENST00000584944 SPTBN4Q9H254 2564 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 TYW5A2RUC4 315 aaKnown RBP14.43□□□□□ -0.1
TRAF4-215ENST00000584944 PRR23AA6NEV1 266 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 SIGLEC16A6NMB1 481 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 SCAMP3O14828 347 aaKnown RBP14.43□□□□□ -0.1
TRAF4-215ENST00000584944 NARSO43776 548 aaKnown RBP14.43□□□□□ -0.1
TRAF4-215ENST00000584944 ADH1CP00326 375 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 CYBBP04839 570 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 H2AFZP0C0S5 128 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 CORO1AP31146 461 aaKnown RBP14.43□□□□□ -0.1
TRAF4-215ENST00000584944 CCR1P32246 355 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 GPC5P78333 572 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 DEUP1Q05D60 604 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 FCHO2Q0JRZ9 810 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 USP4Q13107 963 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 MTA1Q13330 715 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 NNTQ13423 1086 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 ZNF77Q15935 545 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 SLC25A52Q3SY17 297 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 C10orf76Q5T2E6 689 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 SYPL2Q5VXT5 272 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 H2AFVQ71UI9 128 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 DENND1CQ8IV53 801 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 CCDC117Q8IWD4 279 aaPredicted RBP14.43□□□□□ -0.1
TRAF4-215ENST00000584944 SIX5Q8N196 739 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 KIAA1958Q8N8K9 716 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 OSCP1Q8WVF1 389 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 OTUB2Q96DC9 234 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 SHDQ96IW2 340 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 PIWIL1Q96J94 861 aaKnown RBP14.43□□□□□ -0.1
TRAF4-215ENST00000584944 ZFYVE19Q96K21 471 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 SLC2A13Q96QE2 648 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 CHP1Q99653 195 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 PLA2G2FQ9BZM2 168 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 SPTLC3Q9NUV7 552 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 CTTNBP2NLQ9P2B4 639 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 WNT16Q9UBV4 365 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 WNT6Q9Y6F9 365 aa14.43□□□□□ -0.1
TRAF4-215ENST00000584944 ZNF638Q14966 1978 aaKnown RBP14.43□□□□□ -0.1
TRAF4-215ENST00000584944 NOTCH4Q99466 2003 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 KRBA1A5PL33 1030 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 ATMINO43313 823 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-215ENST00000584944 STC2O76061 302 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 MOCS2O96007 188 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-215ENST00000584944 TCF3P15923 654 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 GPD1P21695 349 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 CHKAP35790 457 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 ATP11AP98196 1134 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 RING1Q06587 406 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 CDO1Q16878 200 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 ANO4Q32M45 955 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 ITPRIPL2Q3MIP1 535 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 ARL13BQ3SXY8 428 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 ARCQ7LC44 396 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 TAC4Q86UU9 113 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 CCDC105Q8IYK2 499 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 EMC1Q8N766 993 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 ATP6V0D2Q8N8Y2 350 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 RXFP2Q8WXD0 754 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 DNASE1L2Q92874 299 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 RSPRY1Q96DX4 576 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 CFAP57Q96MR6 1250 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 ISCUQ9H1K1 167 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 EBF3Q9H4W6 596 aa14.42□□□□□ -0.1
TRAF4-215ENST00000584944 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRAF4-215ENST00000584944 RNF8O76064 485 aa14.41□□□□□ -0.1
TRAF4-215ENST00000584944 PSMA2P25787 234 aa14.41□□□□□ -0.1
TRAF4-215ENST00000584944 RFC1P35251 1148 aaPredicted RBP14.41□□□□□ -0.1
TRAF4-215ENST00000584944 FLT3P36888 993 aa14.41□□□□□ -0.1
TRAF4-215ENST00000584944 GALCP54803 685 aa14.41□□□□□ -0.1
TRAF4-215ENST00000584944 GSCP56915 257 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms