RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	FAM163B	P0C2L3	166 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	NPPB	P16860	134 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	KCNA3	P22001	575 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PCSK6	P29122	969 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PDIA3	P30101	505 aa	Known RBP	4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CCT8	P50990	548 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	RENBP	P51606	427 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	NHLH1	Q02575	133 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	EFR3A	Q14156	821 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ST3GAL2	Q16842	350 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ZIK1	Q3SY52	487 aa	Predicted RBP	4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TREML2	Q5T2D2	321 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TANGO2	Q6ICL3	276 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CCDC70	Q6NSX1	233 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CCDC174	Q6PII3	467 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	MTHFD1L	Q6UB35	978 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ZNF788	Q6ZQV5	615 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	RASGRP3	Q8IV61	690 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CCDC28A	Q8IWP9	274 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	MYCT1	Q8N699	235 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	GLIS1	Q8NBF1	620 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	OSCP1	Q8WVF1	389 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SARAF	Q96BY9	339 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SDCCAG3	Q96C92	435 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	GRAMD1A	Q96CP6	724 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PRPF18	Q99633	342 aa	Known RBP	4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	KATNAL1	Q9BW62	490 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PCDHAC1	Q9H158	963 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ARHGEF3	Q9NR81	526 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ZNF69	Q9UC07	566 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CCNL1	Q9UK58	526 aa	Predicted RBP	4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	NDRG4	Q9ULP0	352 aa	Known RBP	4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	USP22	Q9UPT9	525 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	HPSE	Q9Y251	543 aa		4.2	□□□□□ -1.74
PPP4R1-229	ENST00000584754	XIRP1	Q702N8	1843 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	OR2W5	A6NFC9	320 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	EFCAB8	A8MWE9	144 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SRGAP2	O75044	1071 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	VNN1	O95497	513 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	NTSR2	O95665	410 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	NDST3	O95803	873 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PRKCB	P05771	671 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	FES	P07332	822 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DLD	P09622	509 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	NHLRC4	P0CG21	123 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DHRS4L1	P0CG22	281 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	RBL1	P28749	1068 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ADORA2A	P29274	412 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ATIC	P31939	592 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	GATM	P50440	423 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PGD	P52209	483 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PDE1A	P54750	535 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	GPS1	Q13098	491 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ATP1A4	Q13733	1029 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	LY6K	Q17RY6	165 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TBC1D25	Q3MII6	688 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ANKRD45	Q5TZF3	282 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	RRAGB	Q5VZM2	374 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	KLHL17	Q6TDP4	642 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CRTC1	Q6UUV9	634 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	KIAA0408	Q6ZU52	694 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SLC29A4	Q7RTT9	530 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DTX2	Q86UW9	622 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ATG16L2	Q8NAA4	619 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DPF1	Q92782	380 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	HIST1H2AA	Q96QV6	131 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	GLOD4	Q9HC38	313 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	OBP2B	Q9NPH6	170 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TMLHE	Q9NVH6	421 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	STEAP1	Q9UHE8	339 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	FRMD4B	Q9Y2L6	1034 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	RNF17	Q9BXT8	1623 aa	Known RBP	4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	LRRC7	Q96NW7	1537 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	AOX1	Q06278	1338 aa		4.19	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ATP7A	Q04656	1500 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SYCP2	Q9BX26	1530 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	LGALS16	A8MUM7	142 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ACKR2	O00590	384 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SLC16A3	O15427	465 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PIP5K1C	O60331	668 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	IL6R	P08887	468 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DRD4	P21917	467 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	MST1	P26927	711 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CYP2C18	P33260	490 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DDIT3	P35638	169 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CDK7	P50613	346 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PAPOLA	P51003	745 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DGKQ	P52824	942 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SRSF4	Q08170	494 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CSHL1	Q14406	222 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DEPDC1	Q5TB30	811 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	MANEAL	Q5VSG8	457 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CEP85	Q6P2H3	762 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ANKRD16	Q6P6B7	361 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms