RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 ACSM6Q6P461 480 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 YTHDF3Q7Z739 585 aaKnown RBP4.48□□□□□ -1.69
SKA2-210ENST00000584089 SKAP1Q86WV1 359 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 GATAD2AQ86YP4 633 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 ZNF527Q8NB42 609 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 OR52L2PQ8NGH6 319 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 WDR60Q8WVS4 1066 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 PMM1Q92871 262 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 MPHOSPH6Q99547 160 aaKnown RBP4.48□□□□□ -1.69
SKA2-210ENST00000584089 PRPF18Q99633 342 aaKnown RBP4.48□□□□□ -1.69
SKA2-210ENST00000584089 FAM118BQ9BPY3 351 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 SH2D3AQ9BRG2 576 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 PAAF1Q9BRP4 392 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 QTRT1Q9BXR0 403 aaKnown RBP4.48□□□□□ -1.69
SKA2-210ENST00000584089 PLCB1Q9NQ66 1216 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 FSCN3Q9NQT6 498 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 PDGFCQ9NRA1 345 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 FBXO28Q9NVF7 368 aa4.48□□□□□ -1.69
SKA2-210ENST00000584089 MAGED2Q9UNF1 606 aaPredicted RBP4.48□□□□□ -1.69
SKA2-210ENST00000584089 SCAF8Q9UPN6 1271 aaKnown RBP4.48□□□□□ -1.69
SKA2-210ENST00000584089 CYP2D7A0A087X1C5 515 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 CCDC187A0A096LP49 1063 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 SMIM35A0A1B0GVV1 85 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 GXYLT2A0PJZ3 443 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 DSCR3O14972 297 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 ITGA5P08648 1049 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 ALADP13716 330 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 ALDH18A1P54886 795 aaKnown RBP4.47□□□□□ -1.69
SKA2-210ENST00000584089 RHBDL3P58872 404 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 SSBP2P81877 361 aaPredicted RBP4.47□□□□□ -1.69
SKA2-210ENST00000584089 CBFBQ13951 182 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 PTK2BQ14289 1009 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 SPARCL1Q14515 664 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 ZNF268Q14587 947 aaPredicted RBP4.47□□□□□ -1.69
SKA2-210ENST00000584089 DAZAP2Q15038 168 aaPredicted RBP4.47□□□□□ -1.69
SKA2-210ENST00000584089 MSANTD2Q6P1R3 559 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 C1orf228Q6PIY5 440 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 NRSN1Q8IZ57 195 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 SPICE1Q8N0Z3 855 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.47□□□□□ -1.69
SKA2-210ENST00000584089 OSR1Q8TAX0 266 aaPredicted RBP4.47□□□□□ -1.69
SKA2-210ENST00000584089 FAM71BQ8TC56 605 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 GLMPQ8WWB7 406 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 AKAP1Q92667 903 aaKnown RBP eCLIP4.47□□□□□ -1.69
SKA2-210ENST00000584089 MAP4K1Q92918 833 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 NUAK2Q9H093 628 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 TP63Q9H3D4 680 aaPredicted RBP4.47□□□□□ -1.69
SKA2-210ENST00000584089 EPS8L2Q9H6S3 715 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 KCNK9Q9NPC2 374 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 NRIP3Q9NQ35 241 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 VPS4AQ9UN37 437 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 UBE2J1Q9Y385 318 aaPredicted RBP4.47□□□□□ -1.69
SKA2-210ENST00000584089 DAAM1Q9Y4D1 1078 aa4.47□□□□□ -1.69
SKA2-210ENST00000584089 SIRT4Q9Y6E7 314 aaPredicted RBP4.47□□□□□ -1.69
SKA2-210ENST00000584089 ZNF804BA4D1E1 1349 aa4.46□□□□□ -1.69
SKA2-210ENST00000584089 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.46□□□□□ -1.7
SKA2-210ENST00000584089 DNAJC9-AS1A6NH13 148 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 FCHO1O14526 889 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 SKAP2O75563 359 aaPredicted RBP4.46□□□□□ -1.7
SKA2-210ENST00000584089 BCAR3O75815 825 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 SLC3A2P08195 630 aaKnown RBP4.46□□□□□ -1.7
SKA2-210ENST00000584089 CDK4P11802 303 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 TACR3P29371 465 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 GRM4Q14833 912 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 KPNB1Q14974 876 aaKnown RBP4.46□□□□□ -1.7
SKA2-210ENST00000584089 SEC23BQ15437 767 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 FAM110CQ1W6H9 321 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 MTX3Q5HYI7 312 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 ZKSCAN2Q63HK3 967 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 ANO7Q6IWH7 933 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 KRT27Q7Z3Y8 459 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 SLC22A17Q8WUG5 538 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 RSC1A1Q92681 617 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 EID2BQ96D98 161 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 P2RY11Q96G91 374 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 CRB3Q9BUF7 120 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 PRSS22Q9GZN4 317 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 CDCP1Q9H5V8 836 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 OBP2BQ9NPH6 170 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 ARL8BQ9NVJ2 186 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 TAGLN3Q9UI15 199 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 NFU1Q9UMS0 254 aa4.46□□□□□ -1.7
SKA2-210ENST00000584089 HEMK1Q9Y5R4 338 aaPredicted RBP4.46□□□□□ -1.7
SKA2-210ENST00000584089 AQP12BA6NM10 295 aa4.45□□□□□ -1.7
SKA2-210ENST00000584089 M0QZQ0 153 aa4.45□□□□□ -1.7
SKA2-210ENST00000584089 ASNA1O43681 348 aa4.45□□□□□ -1.7
SKA2-210ENST00000584089 ATP5F1P24539 256 aaPredicted RBP4.45□□□□□ -1.7
SKA2-210ENST00000584089 NDUFS1P28331 727 aa4.45□□□□□ -1.7
SKA2-210ENST00000584089 HOXD12P35452 270 aa4.45□□□□□ -1.7
SKA2-210ENST00000584089 ICA1Q05084 483 aa4.45□□□□□ -1.7
SKA2-210ENST00000584089 OS9Q13438 667 aaPredicted RBP4.45□□□□□ -1.7
SKA2-210ENST00000584089 PUM3Q15397 648 aaKnown RBP4.45□□□□□ -1.7
SKA2-210ENST00000584089 ELF2Q15723 593 aa4.45□□□□□ -1.7
SKA2-210ENST00000584089 PFKFB4Q16877 469 aa4.45□□□□□ -1.7
SKA2-210ENST00000584089 SUPT20HL1Q3ZLR7 823 aa4.45□□□□□ -1.7
SKA2-210ENST00000584089 ZACNQ401N2 412 aa4.45□□□□□ -1.7
SKA2-210ENST00000584089 MORN5Q5VZ52 161 aa4.45□□□□□ -1.7
SKA2-210ENST00000584089 ZNF626Q68DY1 528 aa4.45□□□□□ -1.7
SKA2-210ENST00000584089 RINT1Q6NUQ1 792 aa4.45□□□□□ -1.7
SKA2-210ENST00000584089 KYAT3Q6YP21 454 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms