RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 TCP11X2Q5H9J9 407 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 CRELD2Q6UXH1 353 aaPredicted RBP12.11□□□□□ -0.47
NUP85-224ENST00000583948 ZNF720Q7Z2F6 126 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 TMC6Q7Z403 805 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 SYCP3Q8IZU3 236 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 ZNF507Q8TCN5 953 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 MYLPFQ96A32 169 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 NAP1L5Q96NT1 182 aaPredicted RBP12.11□□□□□ -0.47
NUP85-224ENST00000583948 CDC6Q99741 560 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 KCTD10Q9H3F6 313 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 DNAJC17Q9NVM6 304 aaKnown RBP12.11□□□□□ -0.47
NUP85-224ENST00000583948 TRPM5Q9NZQ8 1165 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 DEC1Q9P2X7 70 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 NME7Q9Y5B8 376 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
NUP85-224ENST00000583948 CER1O95813 267 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 OAS1P00973 400 aaKnown RBP12.1□□□□□ -0.47
NUP85-224ENST00000583948 ITGB3P05106 788 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 EEF1GP26641 437 aaKnown RBP12.1□□□□□ -0.47
NUP85-224ENST00000583948 HOXD13P35453 343 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 EIF2DP41214 584 aaKnown RBP12.1□□□□□ -0.47
NUP85-224ENST00000583948 SMTNP53814 917 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 NCKAP1LP55160 1127 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 NFKB2Q00653 900 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 GAD2Q05329 585 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 KCNH2Q12809 1159 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 TAF10Q12962 218 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 ALCAMQ13740 583 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 NFE2Q16621 373 aaPredicted RBP12.1□□□□□ -0.47
NUP85-224ENST00000583948 CCDC40Q4G0X9 1142 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 ZCWPW2Q504Y3 356 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 COLEC12Q5KU26 742 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 TPGS1Q6ZTW0 290 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 NXPE2Q96DL1 559 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 FIZ1Q96SL8 496 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 ACBD6Q9BR61 282 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 ZDHHC5Q9C0B5 715 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 VPS16Q9H269 839 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 C6orf106Q9H6K1 298 aaPredicted RBP12.1□□□□□ -0.47
NUP85-224ENST00000583948 CCSER2Q9H7U1 834 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 PLK2Q9NYY3 685 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 LIMA1Q9UHB6 759 aaKnown RBP12.1□□□□□ -0.47
NUP85-224ENST00000583948 CHORDC1Q9UHD1 332 aaPredicted RBP12.1□□□□□ -0.47
NUP85-224ENST00000583948 UBR5O95071 2799 aaPredicted RBP12.1□□□□□ -0.47
NUP85-224ENST00000583948 FLNCQ14315 2725 aa12.1□□□□□ -0.47
NUP85-224ENST00000583948 TEX51A0A1B0GUA7 166 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 METTL12A8MUP2 240 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 B8ZZF3 427 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 NEDD8-MDP1E9PL57 170 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 F8VP50 259 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 PDXKO00764 312 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 RRP8O43159 456 aaKnown RBP12.09□□□□□ -0.47
NUP85-224ENST00000583948 COCHO43405 550 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 OLFM2O95897 454 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 ZNF883P0CG24 379 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 PRKCSHP14314 528 aaPredicted RBP12.09□□□□□ -0.47
NUP85-224ENST00000583948 TPMTP51580 245 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 TFAMQ00059 246 aaKnown RBP12.09□□□□□ -0.47
NUP85-224ENST00000583948 FKBP3Q00688 224 aaKnown RBP12.09□□□□□ -0.47
NUP85-224ENST00000583948 CYP27A1Q02318 531 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 KCNA1Q09470 495 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 EDRF1Q3B7T1 1238 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 SV2CQ496J9 727 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 HES3Q5TGS1 186 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 FOXR2Q6PJQ5 311 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 HS2ST1Q7LGA3 356 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 IRF2BP1Q8IU81 584 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 C1orf127Q8N9H9 656 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 LSM14AQ8ND56 463 aaKnown RBP12.09□□□□□ -0.47
NUP85-224ENST00000583948 FOXJ1Q92949 421 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 CEP63Q96MT8 703 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 ACCSQ96QU6 501 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 GABRG3Q99928 467 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 CAAP1Q9H8G2 361 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 SPHK2Q9NRA0 654 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 INTS13Q9NVM9 706 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 ANKRD6Q9Y2G4 727 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 SNX9Q9Y5X1 595 aa12.09□□□□□ -0.47
NUP85-224ENST00000583948 PLXNA2O75051 1894 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 NBPF19A0A087WUL8 3843 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 A0A1B0GTH6 734 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.08□□□□□ -0.48
NUP85-224ENST00000583948 CLDN5O00501 218 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 CETN3O15182 167 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 CLIC2O15247 247 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 PPP1R37O75864 691 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 NR3C1P04150 777 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 NR2F2P24468 414 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 SOWAHAQ2M3V2 549 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 KIAA1614Q5VZ46 1190 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 BTBD8Q5XKL5 378 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 GRAMD4Q6IC98 578 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 FAM171BQ6P995 826 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 DENND5BQ6ZUT9 1274 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 APTXQ7Z2E3 356 aaKnown RBP12.08□□□□□ -0.48
NUP85-224ENST00000583948 PRICKLE2Q7Z3G6 844 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 ERICH1Q86X53 443 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 ADGRF2Q8IZF7 708 aa12.08□□□□□ -0.48
NUP85-224ENST00000583948 CXorf38Q8TB03 319 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms