RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 NAA15Q9BXJ9 866 aaKnown RBP10.33□□□□□ -0.76
SKA2-208ENST00000583927 DNAJC17Q9NVM6 304 aaKnown RBP10.33□□□□□ -0.76
SKA2-208ENST00000583927 ANO10Q9NW15 660 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 NCDNQ9UBB6 729 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 DNAJC12Q9UKB3 198 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 GMEB2Q9UKD1 530 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 CHD5Q8TDI0 1954 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 LRRC10BA6NIK2 292 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 FOXN3O00409 490 aaPredicted RBP10.32□□□□□ -0.76
SKA2-208ENST00000583927 IRAK2O43187 625 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 PAPSS1O43252 624 aaPredicted RBP10.32□□□□□ -0.76
SKA2-208ENST00000583927 THAP12O43422 761 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 ADAM23O75077 832 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 RPP40O75818 363 aaKnown RBP10.32□□□□□ -0.76
SKA2-208ENST00000583927 ALDH1A2O94788 518 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 CALCAP01258 141 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 CYBBP04839 570 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 NTSR1P30989 418 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 TIE1P35590 1138 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 SNX16P57768 344 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 KDSRQ06136 332 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 PDCLQ13371 301 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 EIF4EBP2Q13542 120 aaPredicted RBP10.32□□□□□ -0.76
SKA2-208ENST00000583927 ENPP2Q13822 863 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 EIF4HQ15056 248 aaKnown RBP10.32□□□□□ -0.76
SKA2-208ENST00000583927 STX1AQ16623 288 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 MPPE1Q53F39 396 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 CCDC183Q5T5S1 534 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 HEATR6Q6AI08 1181 aaKnown RBP10.32□□□□□ -0.76
SKA2-208ENST00000583927 DENND1BQ6P3S1 775 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 SASS6Q6UVJ0 657 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 TMEM92Q6UXU6 159 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 DENND1CQ8IV53 801 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 SFTPA1Q8IWL2 248 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 SCUBE3Q8IX30 993 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 ALLCQ8N6M5 410 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 ZNF513Q8N8E2 541 aaPredicted RBP10.32□□□□□ -0.76
SKA2-208ENST00000583927 ZNF557Q8N988 423 aaPredicted RBP10.32□□□□□ -0.76
SKA2-208ENST00000583927 TXNDC5Q8NBS9 432 aaKnown RBP10.32□□□□□ -0.76
SKA2-208ENST00000583927 TSTD1Q8NFU3 115 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 OLIG1Q8TAK6 271 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 CLEC4CQ8WTT0 213 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 EDEM1Q92611 657 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 P2RY11Q96G91 374 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 SLC39A13Q96H72 371 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 PIWIL1Q96J94 861 aaKnown RBP10.32□□□□□ -0.76
SKA2-208ENST00000583927 SERPINB11Q96P15 392 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 HHIPQ96QV1 700 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 GABRG3Q99928 467 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 POPDC2Q9HBU9 364 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 POLMQ9NP87 494 aaPredicted RBP10.32□□□□□ -0.76
SKA2-208ENST00000583927 TMEM51Q9NW97 253 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 ASNSD1Q9NWL6 643 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 SFMBT1Q9UHJ3 866 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 CYTH4Q9UIA0 394 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 HCN2Q9UL51 889 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 TLR6Q9Y2C9 796 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 PCDHGA5Q9Y5G8 931 aa10.32□□□□□ -0.76
SKA2-208ENST00000583927 CNOT1A5YKK6 2376 aaKnown RBP10.32□□□□□ -0.76
SKA2-208ENST00000583927 E5RJQ4 531 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 SGK1O00141 431 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 TIMM44O43615 452 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 KLF8O95600 359 aaPredicted RBP10.31□□□□□ -0.76
SKA2-208ENST00000583927 IGLV3-25P01717 112 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 C7P10643 843 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 NCAM1P13591 858 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 UCHL3P15374 230 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 SDHBP21912 280 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 HOXC13P31276 330 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 CDH5P33151 784 aaPredicted RBP10.31□□□□□ -0.76
SKA2-208ENST00000583927 SEC13P55735 322 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 YWHAZP63104 245 aaKnown RBP10.31□□□□□ -0.76
SKA2-208ENST00000583927 APBA1Q02410 837 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 USP39Q53GS9 565 aaKnown RBP10.31□□□□□ -0.76
SKA2-208ENST00000583927 SPDYCQ5MJ68 293 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 C10orf76Q5T2E6 689 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 EMC10Q5UCC4 262 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 PRR23BQ6ZRT6 265 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 CEP68Q76N32 757 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 KIAA0907Q7Z7F0 614 aaPredicted RBP10.31□□□□□ -0.76
SKA2-208ENST00000583927 ZDHHC17Q8IUH5 632 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 WDTC1Q8N5D0 677 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 FAM160A2Q8N612 972 aaPredicted RBP10.31□□□□□ -0.76
SKA2-208ENST00000583927 ZNF397Q8NF99 534 aaPredicted RBP10.31□□□□□ -0.76
SKA2-208ENST00000583927 NOX5Q96PH1 765 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 STK33Q9BYT3 514 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 CD248Q9HCU0 757 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 ACP6Q9NPH0 428 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 ST7Q9NRC1 585 aa10.31□□□□□ -0.76
SKA2-208ENST00000583927 AJAP1Q9UKB5 411 aaPredicted RBP10.31□□□□□ -0.76
SKA2-208ENST00000583927 ANTXRLA6NF34 631 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 PRR5-ARHGAP8B1AHC4 643 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 PRRT4C9JH25 899 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 TRIM24O15164 1050 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 EPN2O95208 641 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 TPM2P07951 284 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 HMBSP08397 361 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 ZNF18P17022 549 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 HOXD9P28356 352 aaPredicted RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 KRT9P35527 623 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms