RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 CCDC186Q7Z3E2 898 aa16.97■□□□□ 0.31
SREBF1-221ENST00000583080 ANKS1BQ7Z6G8 1248 aa16.97■□□□□ 0.31
SREBF1-221ENST00000583080 MARCH9Q86YJ5 346 aa16.97■□□□□ 0.31
SREBF1-221ENST00000583080 SLC9A9Q8IVB4 645 aa16.97■□□□□ 0.31
SREBF1-221ENST00000583080 RBBP8NLQ8NC74 664 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-221ENST00000583080 CADM4Q8NFZ8 388 aa16.97■□□□□ 0.31
SREBF1-221ENST00000583080 FOXD4L4Q8WXT5 416 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-221ENST00000583080 SIPA1Q96FS4 1042 aa16.97■□□□□ 0.31
SREBF1-221ENST00000583080 PIWIL1Q96J94 861 aaKnown RBP16.97■□□□□ 0.31
SREBF1-221ENST00000583080 PNPLA8Q9NP80 782 aa16.97■□□□□ 0.31
SREBF1-221ENST00000583080 TM7SF3Q9NS93 570 aa16.97■□□□□ 0.31
SREBF1-221ENST00000583080 EIF2B4Q9UI10 523 aaKnown RBP16.97■□□□□ 0.31
SREBF1-221ENST00000583080 RAXQ9Y2V3 346 aa16.97■□□□□ 0.31
SREBF1-221ENST00000583080 MUC22E2RYF6 1773 aaPredicted RBP16.97■□□□□ 0.31
SREBF1-221ENST00000583080 IGSF10Q6WRI0 2623 aa16.97■□□□□ 0.31
SREBF1-221ENST00000583080 NUMA1Q14980 2115 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 SMG1Q96Q15 3661 aaKnown RBP16.96■□□□□ 0.31
SREBF1-221ENST00000583080 METTL12A8MUP2 240 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 CER1O95813 267 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 IGLV3-19P01714 112 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 ZNF883P0CG24 379 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 CD58P19256 250 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 MATKP42679 507 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 HLA-BQ31612 363 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 CEP135Q66GS9 1140 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 TMEM215Q68D42 235 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 FAM124AQ86V42 546 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 C1orf216Q8TAB5 229 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 TMC2Q8TDI7 906 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 PRCCQ92733 491 aaPredicted RBP16.96■□□□□ 0.31
SREBF1-221ENST00000583080 NT5C1AQ9BXI3 368 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 AGO1Q9UL18 857 aaKnown RBP16.96■□□□□ 0.31
SREBF1-221ENST00000583080 USP3Q9Y6I4 520 aa16.96■□□□□ 0.31
SREBF1-221ENST00000583080 A0A1B0GVT2 93 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 SYNCRIPO60506 623 aaKnown RBP16.95■□□□□ 0.3
SREBF1-221ENST00000583080 KIF20AO95235 890 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 ATXN1LP0C7T5 689 aaKnown RBP16.95■□□□□ 0.3
SREBF1-221ENST00000583080 TRIM49P0CI25 452 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 TRIM49CP0CI26 452 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 RALAP11233 206 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 HLA-EP13747 358 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 PSEN1P49768 467 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 KMT5BQ4FZB7 885 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 PPP1R26Q5T8A7 1209 aaPredicted RBP16.95■□□□□ 0.3
SREBF1-221ENST00000583080 RESP18Q5W5W9 173 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 TADA2BQ86TJ2 420 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 DENND1CQ8IV53 801 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 TAS1R2Q8TE23 839 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 TMEM174Q8WUU8 243 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 UCMAQ8WVF2 138 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 SNX19Q92543 992 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 CIPCQ9C0C6 399 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 EXOC1Q9NV70 894 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 ELOVL2Q9NXB9 296 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 CLIC5Q9NZA1 410 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 SERTAD1Q9UHV2 236 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 PCDHA7Q9UN72 937 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 BTBD3Q9Y2F9 522 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 ZNF510Q9Y2H8 683 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 KNL1Q8NG31 2342 aa16.95■□□□□ 0.3
SREBF1-221ENST00000583080 NPC1O15118 1278 aa16.94■□□□□ 0.3
SREBF1-221ENST00000583080 EPHX1P07099 455 aa16.94■□□□□ 0.3
SREBF1-221ENST00000583080 OXTRP30559 389 aa16.94■□□□□ 0.3
SREBF1-221ENST00000583080 CHKAP35790 457 aa16.94■□□□□ 0.3
SREBF1-221ENST00000583080 CSNK1EP49674 416 aaKnown RBP16.94■□□□□ 0.3
SREBF1-221ENST00000583080 ZNF132P52740 706 aa16.94■□□□□ 0.3
SREBF1-221ENST00000583080 TMPRSS7Q7RTY8 843 aa16.94■□□□□ 0.3
SREBF1-221ENST00000583080 ZNF276Q8N554 614 aa16.94■□□□□ 0.3
SREBF1-221ENST00000583080 HNRNPLLQ8WVV9 542 aaKnown RBP16.94■□□□□ 0.3
SREBF1-221ENST00000583080 DUSP16Q9BY84 665 aa16.94■□□□□ 0.3
SREBF1-221ENST00000583080 NIF3L1Q9GZT8 377 aa16.94■□□□□ 0.3
SREBF1-221ENST00000583080 C6orf106Q9H6K1 298 aaPredicted RBP16.94■□□□□ 0.3
SREBF1-221ENST00000583080 FAM13BQ9NYF5 915 aa16.94■□□□□ 0.3
SREBF1-221ENST00000583080 TMEM131Q92545 1883 aa16.94■□□□□ 0.3
SREBF1-221ENST00000583080 GOLGA8CPA6NN73 597 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 PDXKO00764 312 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 IKBKBO14920 756 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 ACTN4O43707 911 aaKnown RBP16.93■□□□□ 0.3
SREBF1-221ENST00000583080 DKK1O94907 266 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 ACADMP11310 421 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 TRIM21P19474 475 aaKnown RBP16.93■□□□□ 0.3
SREBF1-221ENST00000583080 ME1P48163 572 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 GCLMP48507 274 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 COG7P83436 770 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 PPP3CAQ08209 521 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 EIF4HQ15056 248 aaKnown RBP16.93■□□□□ 0.3
SREBF1-221ENST00000583080 KIF19Q2TAC6 998 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 ZNF394Q53GI3 561 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 IL27RAQ6UWB1 636 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 LAYNQ6UX15 382 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 SERPINA13PQ6UXR4 307 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 ZNF366Q8N895 744 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 PAGE5Q96GU1 130 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 BBC3Q96PG8 261 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-221ENST00000583080 NUP58Q9BVL2 599 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 IMPG2Q9BZV3 1241 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 DCLK3Q9C098 648 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 CYP3A43Q9HB55 503 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 MARCH2Q9P0N8 246 aa16.93■□□□□ 0.3
SREBF1-221ENST00000583080 KIAA1522Q9P206 1035 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms