RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 EXOC7Q9UPT5 735 aa6.59□□□□□ -1.35
TVP23B-210ENST00000582288 HCRTO43612 131 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 TBCAO75347 108 aaKnown RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 PENKP01210 267 aaPredicted RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 KRT19P08727 400 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 PTPN1P18031 435 aaKnown RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 GARTP22102 1010 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 GNL1P36915 607 aaPredicted RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 CDH8P55286 799 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 PCBP4P57723 403 aaKnown RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 ERVPABLB-1P60509 514 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 RACK1P63244 317 aaKnown RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 ASIC1P78348 528 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 HMGN5P82970 282 aaKnown RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 E2F1Q01094 437 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 PDE4CQ08493 712 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 CAMK2GQ13555 558 aaPredicted RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 GNL2Q13823 731 aaKnown RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 SURF1Q15526 300 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 RILPL1Q5EBL4 403 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 HS2ST1Q7LGA3 356 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 GPBP1Q86WP2 473 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 SKAP1Q86WV1 359 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 CCDC83Q8IWF9 413 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 ZNF276Q8N554 614 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 SAP25Q8TEE9 199 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 FBXO32Q969P5 355 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 BIRC7Q96CA5 298 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 CNDP2Q96KP4 475 aaKnown RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 LGMNQ99538 433 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 ELF4Q99607 663 aaPredicted RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 FAM213AQ9BRX8 229 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 KLF16Q9BXK1 252 aaPredicted RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 ACE2Q9BYF1 805 aaPredicted RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 NACA2Q9H009 215 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 FBXO44Q9H4M3 255 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 ERVMER34-1Q9H9K5 563 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 SGK2Q9HBY8 427 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 CYLDQ9NQC7 956 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 SEL1LQ9UBV2 794 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 TPX2Q9ULW0 747 aaKnown RBP6.58□□□□□ -1.36
TVP23B-210ENST00000582288 SCML1Q9UN30 329 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 CLCA2Q9UQC9 943 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 ZNF510Q9Y2H8 683 aa6.58□□□□□ -1.36
TVP23B-210ENST00000582288 ATP8B3O60423 1300 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 HECTD1Q9ULT8 2610 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 TISP43B9A030 160 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 SLC28A2O43868 658 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 TLR5O60602 858 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 SEMA4FO95754 770 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 STAU1O95793 577 aaKnown RBP6.57□□□□□ -1.36
TVP23B-210ENST00000582288 KRT18P05783 430 aaKnown RBP6.57□□□□□ -1.36
TVP23B-210ENST00000582288 ITGAVP06756 1048 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 PDGFRBP09619 1106 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 TMEM191BP0C7N4 346 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 CKMT2P17540 419 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 GLDCP23378 1020 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 CHKAP35790 457 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 ATP5C1P36542 298 aaKnown RBP6.57□□□□□ -1.36
TVP23B-210ENST00000582288 RXRGP48443 463 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 ARRB1P49407 418 aaPredicted RBP6.57□□□□□ -1.36
TVP23B-210ENST00000582288 GSK3AP49840 483 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 CACNA2D1P54289 1103 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 BCAT1P54687 386 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 MFAP3P55082 362 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 WNT7BP56706 349 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 C21orf59P57076 290 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 VAC14Q08AM6 782 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 CCDC173Q0VFZ6 552 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 ALCAMQ13740 583 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 ZRSR1Q15695 479 aaKnown RBP6.57□□□□□ -1.36
TVP23B-210ENST00000582288 DUOXA2Q1HG44 320 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 CCDC157Q569K6 752 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 MDH1BQ5I0G3 518 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 IGF2-ASQ6U949 168 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 USP49Q70CQ1 688 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 DHX40Q8IX18 779 aaKnown RBP6.57□□□□□ -1.36
TVP23B-210ENST00000582288 OXR1Q8N573 874 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 RBBP8NLQ8NC74 664 aaPredicted RBP6.57□□□□□ -1.36
TVP23B-210ENST00000582288 B3GALNT2Q8NCR0 500 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 OR2T3Q8NH03 318 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 GOLGA1Q92805 767 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 CALML4Q96GE6 196 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 ANKRD36BP1Q96IX9 119 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 PIWIL1Q96J94 861 aaKnown RBP6.57□□□□□ -1.36
TVP23B-210ENST00000582288 ORAI3Q9BRQ5 295 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 SLC2A11Q9BYW1 496 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 SEMA4CQ9C0C4 833 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 MTMR12Q9C0I1 747 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 BTBD1Q9H0C5 482 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 LHX5Q9H2C1 402 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 SNX25Q9H3E2 840 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 C6orf106Q9H6K1 298 aaPredicted RBP6.57□□□□□ -1.36
TVP23B-210ENST00000582288 CCSER2Q9H7U1 834 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 TLR8Q9NR97 1041 aaKnown RBP6.57□□□□□ -1.36
TVP23B-210ENST00000582288 BLOC1S4Q9NUP1 217 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 TMEM30AQ9NV96 361 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 INTS13Q9NVM9 706 aa6.57□□□□□ -1.36
TVP23B-210ENST00000582288 ELOVL2Q9NXB9 296 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms