RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 USP17L7P0C7H9 530 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 SRGAP2BP0DMP2 458 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 RBP3P10745 1247 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 CPB1P15086 417 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 CYP2F1P24903 491 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 NR2C2P49116 596 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 NDUFV1P49821 464 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 AIF1P55008 147 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 DAOAP59103 153 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 DSC1Q08554 894 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 SMARCB1Q12824 385 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 MMRN1Q13201 1228 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 DPYSL3Q14195 570 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 SKIDA1Q1XH10 827 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 KIAA1841Q6NSI8 718 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 C4orf22Q6V702 233 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 PAQR9Q6ZVX9 377 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 TRMT10CQ7L0Y3 403 aaKnown RBP9.64□□□□□ -0.87
SS18-220ENST00000582092 TMC3Q7Z5M5 1100 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 CDKL3Q8IVW4 592 aaPredicted RBP9.64□□□□□ -0.87
SS18-220ENST00000582092 ARHGAP18Q8N392 663 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 ALLCQ8N6M5 410 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 COLGALT1Q8NBJ5 622 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 TSEN2Q8NCE0 465 aaKnown RBP9.64□□□□□ -0.87
SS18-220ENST00000582092 FAM76AQ8TAV0 307 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 FBXO25Q8TCJ0 367 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 CENPIQ92674 756 aaPredicted RBP9.64□□□□□ -0.87
SS18-220ENST00000582092 NKD2Q969F2 451 aaPredicted RBP9.64□□□□□ -0.87
SS18-220ENST00000582092 PIWIL1Q96J94 861 aaKnown RBP9.64□□□□□ -0.87
SS18-220ENST00000582092 CASD1Q96PB1 797 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 KCNK16Q96T55 309 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 ZNF670Q9BS34 389 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 TMEM175Q9BSA9 504 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 STMN4Q9H169 189 aaPredicted RBP9.64□□□□□ -0.87
SS18-220ENST00000582092 FBXO44Q9H4M3 255 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 PCDH18Q9HCL0 1135 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 ALG13Q9NP73 1137 aaKnown RBP9.64□□□□□ -0.87
SS18-220ENST00000582092 ABI2Q9NYB9 513 aaPredicted RBP9.64□□□□□ -0.87
SS18-220ENST00000582092 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.64□□□□□ -0.87
SS18-220ENST00000582092 STK39Q9UEW8 545 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 NCOR1O75376 2440 aa9.64□□□□□ -0.87
SS18-220ENST00000582092 ATG2AQ2TAZ0 1938 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 C3orf70A6NLC5 250 aaPredicted RBP9.63□□□□□ -0.87
SS18-220ENST00000582092 ZNF487B1APH4 448 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 BHMG1C9JSJ3 638 aaPredicted RBP9.63□□□□□ -0.87
SS18-220ENST00000582092 GRM6O15303 877 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 CREB3O43889 395 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 PPFIA2O75334 1257 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 FGF18O76093 207 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 OAZ2O95190 189 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 ITGB1P05556 798 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 CD48P09326 243 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 RARGP13631 454 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 IGFBP6P24592 240 aaPredicted RBP9.63□□□□□ -0.87
SS18-220ENST00000582092 GATMP50440 423 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 HDAC4P56524 1084 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 KRT71Q3SY84 523 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 ZC3H12AQ5D1E8 599 aaKnown RBP9.63□□□□□ -0.87
SS18-220ENST00000582092 KIAA0319Q5VV43 1072 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 KCNT2Q6UVM3 1135 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 VSTM1Q6UX27 236 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 PPP1R21Q6ZMI0 780 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 ZC3H18Q86VM9 953 aaKnown RBP9.63□□□□□ -0.87
SS18-220ENST00000582092 FAM131BQ86XD5 332 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 SPPL3Q8TCT6 385 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 POF1BQ8WVV4 589 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 NDRG1Q92597 394 aaKnown RBP9.63□□□□□ -0.87
SS18-220ENST00000582092 PABPC5Q96DU9 382 aaKnown RBP9.63□□□□□ -0.87
SS18-220ENST00000582092 TMEM169Q96HH4 297 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 PEBP4Q96S96 227 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 TMEM121Q9BTD3 319 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 COL25A1Q9BXS0 654 aaPredicted RBP9.63□□□□□ -0.87
SS18-220ENST00000582092 NEUROG2Q9H2A3 272 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 PABPC3Q9H361 631 aaKnown RBP9.63□□□□□ -0.87
SS18-220ENST00000582092 WDCPQ9H6R7 721 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 NRDE2Q9H7Z3 1164 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 UBE2ZQ9H832 354 aaPredicted RBP9.63□□□□□ -0.87
SS18-220ENST00000582092 PCDH9Q9HC56 1237 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 CSNK1G1Q9HCP0 422 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 PNPLA8Q9NP80 782 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 PRDM6Q9NQX0 595 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 TLR9Q9NR96 1032 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 ABCC13Q9NSE7 274 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 ZDHHC18Q9NUE0 388 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 DDIT4Q9NX09 232 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 SPG21Q9NZD8 308 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 GRHL1Q9NZI5 618 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 RCOR3Q9P2K3 495 aaPredicted RBP9.63□□□□□ -0.87
SS18-220ENST00000582092 NAALADL1Q9UQQ1 740 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 LZTS1Q9Y250 596 aa9.63□□□□□ -0.87
SS18-220ENST00000582092 TLDC2A0PJX2 215 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 A6NNZ2 444 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 YJEFN3A6XGL0 299 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 HMGB1P1B2RPK0 211 aaPredicted RBP9.62□□□□□ -0.87
SS18-220ENST00000582092 E7ENQ6 273 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 EEF2KO00418 725 aaKnown RBP9.62□□□□□ -0.87
SS18-220ENST00000582092 DNALI1O14645 258 aaPredicted RBP9.62□□□□□ -0.87
SS18-220ENST00000582092 GABBR2O75899 941 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 ENDOD1O94919 500 aa9.62□□□□□ -0.87
SS18-220ENST00000582092 IVLP07476 585 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms