RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 HNRNPLP14866 589 aaKnown RBP eCLIP20.34■□□□□ 0.85
SREBF1-220ENST00000581707 KCNMA1Q12791 1236 aa20.34■□□□□ 0.85
SREBF1-220ENST00000581707 ANO7Q6IWH7 933 aa20.34■□□□□ 0.85
SREBF1-220ENST00000581707 TMEM110Q86TL2 294 aa20.34■□□□□ 0.85
SREBF1-220ENST00000581707 FAM160A2Q8N612 972 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-220ENST00000581707 FAM149B1Q96BN6 582 aa20.34■□□□□ 0.85
SREBF1-220ENST00000581707 TAB2Q9NYJ8 693 aa20.34■□□□□ 0.85
SREBF1-220ENST00000581707 RALGAPA1Q6GYQ0 2036 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 PRRT4C9JH25 899 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 E5RJQ4 531 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 LATS1O95835 1130 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 FYNP06241 537 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 CLCN1P35523 988 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 CCDC183Q5T5S1 534 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 ADGRF1Q5T601 910 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 KLHDC7AQ5VTJ3 777 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 CDKAL1Q5VV42 579 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 KBTBD6Q86V97 674 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 RASSF3Q86WH2 238 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 UNC45BQ8IWX7 931 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 FAM71AQ8IYT1 594 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 DDI1Q8WTU0 396 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 POLMQ9NP87 494 aaPredicted RBP20.33■□□□□ 0.85
SREBF1-220ENST00000581707 STOML2Q9UJZ1 356 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 HCN2Q9UL51 889 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 PCDHGC3Q9UN70 934 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 SLC27A6Q9Y2P4 619 aa20.33■□□□□ 0.85
SREBF1-220ENST00000581707 DMXL1Q9Y485 3027 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 PAPSS1O43252 624 aaPredicted RBP20.32■□□□□ 0.84
SREBF1-220ENST00000581707 IGLV3-27P01718 113 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 PNMA6AP0CW24 399 aaPredicted RBP20.32■□□□□ 0.84
SREBF1-220ENST00000581707 NTSR1P30989 418 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 KRT9P35527 623 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 TBX4P57082 545 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 BPIFB4P59827 614 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 RING1Q06587 406 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 SPEM2Q0P670 501 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 PDCLQ13371 301 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 RAPGEF1Q13905 1077 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 DRAP1Q14919 205 aaPredicted RBP20.32■□□□□ 0.84
SREBF1-220ENST00000581707 STX1AQ16623 288 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 MPPE1Q53F39 396 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 USP39Q53GS9 565 aaKnown RBP20.32■□□□□ 0.84
SREBF1-220ENST00000581707 EGFLAMQ63HQ2 1017 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 SDE2Q6IQ49 451 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 SLC47A2Q86VL8 602 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 PASD1Q8IV76 773 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 WDTC1Q8N5D0 677 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 TRIM62Q9BVG3 475 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 LSM14BQ9BX40 385 aaKnown RBP20.32■□□□□ 0.84
SREBF1-220ENST00000581707 VPS16Q9H269 839 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 LHX5Q9H2C1 402 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 FANCLQ9NW38 375 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 NAALADL1Q9UQQ1 740 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 CEP250Q9BV73 2442 aa20.32■□□□□ 0.84
SREBF1-220ENST00000581707 CAPN9O14815 690 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 TSPAN3O60637 253 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 LRP3O75074 770 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 TPM2P07951 284 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 TGM1P22735 817 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 WASP42768 502 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 ZNF445P59923 1031 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 KRT31Q15323 416 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 NUGGCQ68CJ6 796 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 C11orf57Q6ZUT1 292 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-220ENST00000581707 BEND5Q7L4P6 421 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 CHPFQ8IZ52 775 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 MDGA1Q8NFP4 955 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 DQX1Q8TE96 717 aaKnown RBP20.31■□□□□ 0.84
SREBF1-220ENST00000581707 TMA16Q96EY4 203 aaKnown RBP20.31■□□□□ 0.84
SREBF1-220ENST00000581707 LOXL4Q96JB6 756 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 ZC3H10Q96K80 434 aaKnown RBP20.31■□□□□ 0.84
SREBF1-220ENST00000581707 SERPINB11Q96P15 392 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 SLC2A11Q9BYW1 496 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 TPSD1Q9BZJ3 242 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 PARD6AQ9NPB6 346 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 USP18Q9UMW8 372 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 FHOD1Q9Y613 1164 aa20.31■□□□□ 0.84
SREBF1-220ENST00000581707 DCLK1O15075 740 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 UCHL3P15374 230 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 SLC11A2P49281 568 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 YWHAZP63104 245 aaKnown RBP20.3■□□□□ 0.84
SREBF1-220ENST00000581707 SYPL2Q5VXT5 272 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 HMGB4Q8WW32 186 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 AZIN2Q96A70 460 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 PPP1R13BQ96KQ4 1090 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 NOX5Q96PH1 765 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 CPXM1Q96SM3 734 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 ACOX2Q99424 681 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 POPDC2Q9HBU9 364 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 BCCIPQ9P287 314 aaKnown RBP eCLIP20.3■□□□□ 0.84
SREBF1-220ENST00000581707 TJP2Q9UDY2 1190 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 CLEC4EQ9ULY5 219 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 INVSQ9Y283 1065 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 TLR6Q9Y2C9 796 aa20.3■□□□□ 0.84
SREBF1-220ENST00000581707 TCRBV21S2A2A0A5A6 115 aa20.29■□□□□ 0.84
SREBF1-220ENST00000581707 GFRA2O00451 464 aa20.29■□□□□ 0.84
SREBF1-220ENST00000581707 HOXB2P14652 356 aa20.29■□□□□ 0.84
SREBF1-220ENST00000581707 HOXD9P28356 352 aaPredicted RBP20.29■□□□□ 0.84
SREBF1-220ENST00000581707 MYL5Q02045 173 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms