RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 SMOC1Q9H4F8 434 aa13.13□□□□□ -0.31
CBX1-206ENST00000581003 ABCC13Q9NSE7 274 aa13.13□□□□□ -0.31
CBX1-206ENST00000581003 XPO7Q9UIA9 1087 aaKnown RBP13.13□□□□□ -0.31
CBX1-206ENST00000581003 RAD54BQ9Y620 910 aa13.13□□□□□ -0.31
CBX1-206ENST00000581003 DNAH14Q0VDD8 3507 aa13.13□□□□□ -0.31
CBX1-206ENST00000581003 ZNF292O60281 2723 aa13.13□□□□□ -0.31
CBX1-206ENST00000581003 DCHS1Q96JQ0 3298 aa13.13□□□□□ -0.31
CBX1-206ENST00000581003 WASH3PC4AMC7 463 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 GFRA2O00451 464 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 GRAP2O75791 330 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 NCAM1P13591 858 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 SLC6A4P31645 630 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 DGKGP49619 791 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 MRPS21P82921 87 aaKnown RBP13.12□□□□□ -0.31
CBX1-206ENST00000581003 SPEM2Q0P670 501 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 DRAP1Q14919 205 aaPredicted RBP13.12□□□□□ -0.31
CBX1-206ENST00000581003 NCAPHQ15003 741 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 STX1AQ16623 288 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 PTPN20Q4JDL3 420 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 C2CD6Q53TS8 623 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 FAM133BQ5BKY9 247 aaKnown RBP13.12□□□□□ -0.31
CBX1-206ENST00000581003 CCDC183Q5T5S1 534 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 TAF3Q5VWG9 929 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 NADSYN1Q6IA69 706 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 KIAA1211LQ6NV74 962 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 SASS6Q6UVJ0 657 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 CEP68Q76N32 757 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.12□□□□□ -0.31
CBX1-206ENST00000581003 FAM217AQ8IXS0 508 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 FAM71AQ8IYT1 594 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 WFDC5Q8TCV5 224 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 GAB3Q8WWW8 586 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 RLN3Q8WXF3 142 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 SORCS1Q8WY21 1168 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 IRGQQ8WZA9 623 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 EXOC4Q96A65 974 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 FAM149B1Q96BN6 582 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 FCRL2Q96LA5 508 aaPredicted RBP13.12□□□□□ -0.31
CBX1-206ENST00000581003 PRICKLE1Q96MT3 831 aaPredicted RBP13.12□□□□□ -0.31
CBX1-206ENST00000581003 GANQ9H2C0 597 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 CD93Q9NPY3 652 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 OLA1Q9NTK5 396 aaKnown RBP13.12□□□□□ -0.31
CBX1-206ENST00000581003 CACNA2D2Q9NY47 1150 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 WDR35Q9P2L0 1181 aa13.12□□□□□ -0.31
CBX1-206ENST00000581003 GVINP1Q7Z2Y8 2422 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 OTOGLQ3ZCN5 2332 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 A0A1W2PQF6 199 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 TCRBV21S2A2A0A5A6 115 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 GOLGA6L22H0YM25 854 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 MED7O43513 233 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 FBXO21O94952 628 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 ATP1A3P13637 1013 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 UCHL3P15374 230 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 EEF1GP26641 437 aaKnown RBP13.11□□□□□ -0.31
CBX1-206ENST00000581003 HOXD9P28356 352 aaPredicted RBP13.11□□□□□ -0.31
CBX1-206ENST00000581003 TNFRSF4P43489 277 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 NUMBP49757 651 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 TBX4P57082 545 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 TYRO3Q06418 890 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 TMEM215Q68D42 235 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 FAM183BPQ6ZVS7 135 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 APTXQ7Z2E3 356 aaKnown RBP13.11□□□□□ -0.31
CBX1-206ENST00000581003 TMEM110Q86TL2 294 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 NOP9Q86U38 636 aaKnown RBP13.11□□□□□ -0.31
CBX1-206ENST00000581003 RASSF3Q86WH2 238 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 CAMKK1Q8N5S9 505 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 AOPEPQ8N6M6 819 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 SLC20A1Q8WUM9 679 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 HMGB4Q8WW32 186 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 XPO6Q96QU8 1125 aaKnown RBP13.11□□□□□ -0.31
CBX1-206ENST00000581003 ADAM33Q9BZ11 813 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 DCLK3Q9C098 648 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 CD248Q9HCU0 757 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 FAM207AQ9NSI2 230 aaPredicted RBP13.11□□□□□ -0.31
CBX1-206ENST00000581003 CALCOCO1Q9P1Z2 691 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 FBXO10Q9UK96 956 aa13.11□□□□□ -0.31
CBX1-206ENST00000581003 HBS1LQ9Y450 684 aaKnown RBP13.11□□□□□ -0.31
CBX1-206ENST00000581003 SYNJ2BP-COX16A0A087WUM0 186 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 F8VZ95 297 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 MBD3O95983 291 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 MOCS2O96007 188 aaPredicted RBP13.1□□□□□ -0.31
CBX1-206ENST00000581003 CYP11B1P15538 503 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 HARS2P49590 506 aaKnown RBP13.1□□□□□ -0.31
CBX1-206ENST00000581003 COPB1P53618 953 aaKnown RBP13.1□□□□□ -0.31
CBX1-206ENST00000581003 MYL5Q02045 173 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 OTUD1Q5VV17 481 aaPredicted RBP13.1□□□□□ -0.31
CBX1-206ENST00000581003 LAIR1Q6GTX8 287 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 CAVIN1Q6NZI2 390 aaKnown RBP13.1□□□□□ -0.31
CBX1-206ENST00000581003 CPXM2Q8N436 756 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 DDI1Q8WTU0 396 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 STK32AQ8WU08 396 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 DDX1Q92499 740 aaKnown RBP13.1□□□□□ -0.31
CBX1-206ENST00000581003 RMDN1Q96DB5 314 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 PPP1R13BQ96KQ4 1090 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 NUCKS1Q9H1E3 243 aaKnown RBP13.1□□□□□ -0.31
CBX1-206ENST00000581003 DUSP15Q9H1R2 295 aaPredicted RBP13.1□□□□□ -0.31
CBX1-206ENST00000581003 ANO10Q9NW15 660 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 COX16Q9P0S2 106 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 USP18Q9UMW8 372 aa13.1□□□□□ -0.31
CBX1-206ENST00000581003 PCDHGC3Q9UN70 934 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms