RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PPM1EQ8WY54 764 aa10.84□□□□□ -0.67
CCDC47-203ENST00000580986 EDEM1Q92611 657 aa10.84□□□□□ -0.67
CCDC47-203ENST00000580986 SMARCD2Q92925 531 aa10.84□□□□□ -0.67
CCDC47-203ENST00000580986 AZIN2Q96A70 460 aa10.84□□□□□ -0.67
CCDC47-203ENST00000580986 PLD4Q96BZ4 506 aa10.84□□□□□ -0.67
CCDC47-203ENST00000580986 SLC39A13Q96H72 371 aa10.84□□□□□ -0.67
CCDC47-203ENST00000580986 KLF16Q9BXK1 252 aaPredicted RBP10.84□□□□□ -0.67
CCDC47-203ENST00000580986 IRX2Q9BZI1 471 aaPredicted RBP10.84□□□□□ -0.67
CCDC47-203ENST00000580986 RNF38Q9H0F5 515 aa10.84□□□□□ -0.67
CCDC47-203ENST00000580986 TDP1Q9NUW8 608 aa10.84□□□□□ -0.67
CCDC47-203ENST00000580986 CTTNBP2NLQ9P2B4 639 aa10.84□□□□□ -0.67
CCDC47-203ENST00000580986 MYO1AQ9UBC5 1043 aa10.84□□□□□ -0.67
CCDC47-203ENST00000580986 IP6K2Q9UHH9 426 aa10.84□□□□□ -0.67
CCDC47-203ENST00000580986 ANAPC7Q9UJX3 599 aa10.84□□□□□ -0.67
CCDC47-203ENST00000580986 E2F8A0AVK6 867 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 RCCD1A6NED2 376 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 GOLGA6L9A6NEM1 432 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 ANHXE9PGG2 379 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 CCP110O43303 1012 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 ZSCAN12O43309 604 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 ECI2O75521 394 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 GRAP2O75791 330 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 ABL1P00519 1130 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 GJA1P17302 382 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 CCR1P32246 355 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 RDXP35241 583 aaKnown RBP10.83□□□□□ -0.68
CCDC47-203ENST00000580986 PCK1P35558 622 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 SLC1A1P43005 524 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 CXCR3P49682 368 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 ZNF252P-AS1Q0IIN9 211 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 CLUL1Q15846 466 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 ZNF77Q15935 545 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 CCDC14Q49A88 953 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 OTUD1Q5VV17 481 aaPredicted RBP10.83□□□□□ -0.68
CCDC47-203ENST00000580986 C11orf63Q6NUN7 778 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 TAC4Q86UU9 113 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 DNAAF5Q86Y56 855 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 PSTKQ8IV42 348 aaKnown RBP10.83□□□□□ -0.68
CCDC47-203ENST00000580986 ARID3BQ8IVW6 561 aaPredicted RBP10.83□□□□□ -0.68
CCDC47-203ENST00000580986 UNC45BQ8IWX7 931 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 CELF5Q8N6W0 485 aaKnown RBP10.83□□□□□ -0.68
CCDC47-203ENST00000580986 EMC1Q8N766 993 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 TDRD5Q8NAT2 981 aaKnown RBP10.83□□□□□ -0.68
CCDC47-203ENST00000580986 NTAN1Q96AB6 310 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 ELSPBP1Q96BH3 223 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 OTUB2Q96DC9 234 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 CFAP57Q96MR6 1250 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 SLC22A12Q96S37 553 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 MYADMQ96S97 322 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 DESI2Q9BSY9 194 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 DCLK3Q9C098 648 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 LACRTQ9GZZ8 138 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 NACA2Q9H009 215 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 SLITRK6Q9H5Y7 841 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 TRPC7Q9HCX4 862 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCDC47-203ENST00000580986 CDH22Q9UJ99 828 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 STOML2Q9UJZ1 356 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 ZNF510Q9Y2H8 683 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 PPP2R2CQ9Y2T4 447 aa10.83□□□□□ -0.68
CCDC47-203ENST00000580986 M0QYT0 321 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 STC2O76061 302 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 RNF8O76064 485 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 PROSCO94903 275 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 TBX18O95935 607 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 MBL2P11226 248 aaPredicted RBP10.82□□□□□ -0.68
CCDC47-203ENST00000580986 FCARP24071 287 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 PSMA2P25787 234 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 SULT1E1P49888 294 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 HDAC4P56524 1084 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 RNASE9P60153 205 aaKnown RBP10.82□□□□□ -0.68
CCDC47-203ENST00000580986 OGDHQ02218 1023 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 DEUP1Q05D60 604 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 FCHO2Q0JRZ9 810 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 SCAPQ12770 1279 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 EFEMP1Q12805 493 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 FAM78AQ5JUQ0 283 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 HTR3DQ70Z44 454 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 SND1Q7KZF4 910 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCDC47-203ENST00000580986 FAM217AQ8IXS0 508 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 DEPDC1BQ8WUY9 529 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 ING5Q8WYH8 240 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 USP13Q92995 863 aaPredicted RBP10.82□□□□□ -0.68
CCDC47-203ENST00000580986 ZSWIM3Q96MP5 696 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 TBCBQ99426 244 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 ZFP14Q9HCL3 533 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 OSGEPQ9NPF4 335 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 DDIT4Q9NX09 232 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 ARHGEF38Q9NXL2 777 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 IGSF9Q9P2J2 1179 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 TBC1D14Q9P2M4 693 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 RASAL2Q9UJF2 1139 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 CPQQ9Y646 472 aa10.82□□□□□ -0.68
CCDC47-203ENST00000580986 KCNU1A8MYU2 1149 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 LOC730098B7Z3J9 87 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 SLC9A3R1O14745 358 aaPredicted RBP10.81□□□□□ -0.68
CCDC47-203ENST00000580986 GREM1O60565 184 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 LRCH4O75427 683 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 GJB6O95452 261 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 PRAMEF12O95522 483 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms