RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 PREPLQ4J6C6 727 aaPredicted RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 CAVIN4Q5BKX8 364 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 MTX3Q5HYI7 312 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 NEK10Q6ZWH5 1172 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 PPP1R42Q7Z4L9 355 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 NUP93Q8N1F7 819 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 Q8NA96 180 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 PCYOX1LQ8NBM8 494 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 CTCFLQ8NI51 663 aaPredicted RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 UCMAQ8WVF2 138 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 DPF2Q92785 391 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 CYFIP2Q96F07 1278 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 UBXN10Q96LJ8 280 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 ZSCAN31Q96LW9 406 aaPredicted RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 C16orf45Q96MC5 204 aaPredicted RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 AIFM3Q96NN9 605 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 MED15Q96RN5 788 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 MMTAG2Q9BU76 263 aaKnown RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 EDEM3Q9BZQ6 932 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 TRIM5Q9C035 493 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 NACA2Q9H009 215 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 FAM204AQ9H8W3 233 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 NMRK2Q9NPI5 230 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 ZNF277Q9NRM2 450 aaPredicted RBP4.33□□□□□ -1.72
SMG8-205ENST00000580798 IL20Q9NYY1 176 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 UBAP1Q9NZ09 502 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 ZNF112Q9UJU3 913 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 SNX8Q9Y5X2 465 aa4.33□□□□□ -1.72
SMG8-205ENST00000580798 AKNAQ7Z591 1439 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 TNKSO95271 1327 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 CCDC169A6NNP5 214 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 B4E171 279 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 SGK1O00141 431 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 FRS3O43559 492 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 CEP104O60308 925 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 FGFR1OPO95684 399 aaKnown RBP4.32□□□□□ -1.72
SMG8-205ENST00000580798 MYBL2P10244 700 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 ARF4P18085 180 aaPredicted RBP4.32□□□□□ -1.72
SMG8-205ENST00000580798 FOLR3P41439 243 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 MATR3P43243 847 aaKnown RBP eCLIP4.32□□□□□ -1.72
SMG8-205ENST00000580798 MSH2P43246 934 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 RECQLP46063 649 aaPredicted RBP4.32□□□□□ -1.72
SMG8-205ENST00000580798 SULT1E1P49888 294 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 ALDH5A1P51649 535 aaPredicted RBP4.32□□□□□ -1.72
SMG8-205ENST00000580798 RBM5P52756 815 aaKnown RBP eCLIP4.32□□□□□ -1.72
SMG8-205ENST00000580798 BLVRAP53004 296 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 DEUP1Q05D60 604 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 AP1B1Q10567 949 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 BLMHQ13867 455 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 ABCB5Q2M3G0 1257 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 CCDC38Q502W7 563 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 KIAA0895LQ68EN5 471 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 PLEKHM3Q6ZWE6 761 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 KRT74Q7RTS7 529 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 SRGAP1Q7Z6B7 1085 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 ZER1Q7Z7L7 766 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 GALNT7Q86SF2 657 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 TRIM74Q86UV6 250 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 TRIM73Q86UV7 250 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 LRRC71Q8N4P6 559 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 TMCO5AQ8N6Q1 288 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 VGLL2Q8N8G2 317 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 DCBLD1Q8N8Z6 715 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 SPC24Q8NBT2 197 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 ZNF540Q8NDQ6 660 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 TOR1AIP2Q8NFQ8 470 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 SPATA3Q8NHX4 192 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 DEPTORQ8TB45 409 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 NOC3LQ8WTT2 800 aaKnown RBP4.32□□□□□ -1.72
SMG8-205ENST00000580798 COG1Q8WTW3 980 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 CENPIQ92674 756 aaPredicted RBP4.32□□□□□ -1.72
SMG8-205ENST00000580798 TMEM125Q96AQ2 219 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 LRRC45Q96CN5 670 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 NRBF2Q96F24 287 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 SGCZQ96LD1 299 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 CEP295NLQ96MC4 621 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 ASB2Q96Q27 587 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 SLC2A13Q96QE2 648 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 SLF1Q9BQI6 1058 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 NAA15Q9BXJ9 866 aaKnown RBP4.32□□□□□ -1.72
SMG8-205ENST00000580798 TLR10Q9BXR5 811 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 ADGRE3Q9BY15 652 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 STMN4Q9H169 189 aaPredicted RBP4.32□□□□□ -1.72
SMG8-205ENST00000580798 MROH8Q9H579 483 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 RABEP2Q9H5N1 569 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 MANSC1Q9H8J5 431 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 TCF7L1Q9HCS4 588 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 XAB2Q9HCS7 855 aaKnown RBP4.32□□□□□ -1.72
SMG8-205ENST00000580798 OLA1Q9NTK5 396 aaKnown RBP4.32□□□□□ -1.72
SMG8-205ENST00000580798 FLRT1Q9NZU1 646 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 GPR45Q9Y5Y3 372 aa4.32□□□□□ -1.72
SMG8-205ENST00000580798 ATAD2BQ9ULI0 1458 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 CNTNAP2Q9UHC6 1331 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 C17orf113A0A1B0GUU1 675 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 MCF2LO15068 1137 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 YY2O15391 372 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 PQBP1O60828 265 aaKnown RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 NOL3O60936 208 aaKnown RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 ERLIN1O75477 346 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms