RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 SP9P0CG40 484 aa17.11■□□□□ 0.33
IFT20-210ENST00000580357 SLC2A3P11169 496 aa17.11■□□□□ 0.33
IFT20-210ENST00000580357 E2F5Q15329 346 aa17.11■□□□□ 0.33
IFT20-210ENST00000580357 HSF5Q4G112 596 aaPredicted RBP17.11■□□□□ 0.33
IFT20-210ENST00000580357 MPPE1Q53F39 396 aa17.11■□□□□ 0.33
IFT20-210ENST00000580357 ADGRF1Q5T601 910 aa17.11■□□□□ 0.33
IFT20-210ENST00000580357 ZC3H14Q6PJT7 736 aaKnown RBP17.11■□□□□ 0.33
IFT20-210ENST00000580357 LRSAM1Q6UWE0 723 aa17.11■□□□□ 0.33
IFT20-210ENST00000580357 TPGS1Q6ZTW0 290 aa17.11■□□□□ 0.33
IFT20-210ENST00000580357 SLC26A9Q7LBE3 791 aa17.11■□□□□ 0.33
IFT20-210ENST00000580357 ETFBKMTQ8IXQ9 262 aa17.11■□□□□ 0.33
IFT20-210ENST00000580357 FAM217AQ8IXS0 508 aa17.11■□□□□ 0.33
IFT20-210ENST00000580357 KCNV2Q8TDN2 545 aa17.11■□□□□ 0.33
IFT20-210ENST00000580357 SEMA4AQ9H3S1 761 aa17.11■□□□□ 0.33
IFT20-210ENST00000580357 TSPY26PQ9H489 355 aa17.11■□□□□ 0.33
IFT20-210ENST00000580357 RBM12Q9NTZ6 932 aaKnown RBP17.11■□□□□ 0.33
IFT20-210ENST00000580357 NOCTQ9UK39 431 aaKnown RBP17.11■□□□□ 0.33
IFT20-210ENST00000580357 NEDD8-MDP1E9PL57 170 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 IRAK2O43187 625 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 CACNG3O60359 315 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 IGLV3-27P01718 113 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 CYP1A1P04798 512 aaPredicted RBP17.1■□□□□ 0.33
IFT20-210ENST00000580357 TPM3P06753 285 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 TYRP14679 529 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 SLC6A11P48066 632 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 MRPS21P82921 87 aaKnown RBP17.1■□□□□ 0.33
IFT20-210ENST00000580357 CSTF1Q05048 431 aaKnown RBP17.1■□□□□ 0.33
IFT20-210ENST00000580357 PTPN20Q4JDL3 420 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 DCAF6Q58WW2 860 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 FIGNQ5HY92 759 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 PPP1R2P3Q6NXS1 205 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 DQX1Q8TE96 717 aaKnown RBP17.1■□□□□ 0.33
IFT20-210ENST00000580357 ACDQ96AP0 544 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 SLC2A13Q96QE2 648 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 SLC2A11Q9BYW1 496 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 NUCKS1Q9H1E3 243 aaKnown RBP17.1■□□□□ 0.33
IFT20-210ENST00000580357 PRMT8Q9NR22 394 aaPredicted RBP17.1■□□□□ 0.33
IFT20-210ENST00000580357 ARHGEF4Q9NR80 690 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.1■□□□□ 0.33
IFT20-210ENST00000580357 FBXO10Q9UK96 956 aa17.1■□□□□ 0.33
IFT20-210ENST00000580357 TBC1D3BA6NDS4 549 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 TULP3O75386 442 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 KAT7O95251 611 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 ERBB2P04626 1255 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 HOXA6P31267 233 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 NOS2P35228 1153 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 NOMO3P69849 1222 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 MPP7Q5T2T1 576 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 SYPL2Q5VXT5 272 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 GRAMD4Q6IC98 578 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 OLFML1Q6UWY5 402 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 FAM183BPQ6ZVS7 135 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 ARCQ7LC44 396 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 MAML2Q8IZL2 1156 aaPredicted RBP17.09■□□□□ 0.33
IFT20-210ENST00000580357 NAT16Q8N8M0 369 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 CPA5Q8WXQ8 436 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 TMA16Q96EY4 203 aaKnown RBP17.09■□□□□ 0.33
IFT20-210ENST00000580357 PHOX2BQ99453 314 aa17.09■□□□□ 0.33
IFT20-210ENST00000580357 K7EQS6 105 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 ACSL4O60488 711 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 RNF40O75150 1001 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 TRUB2O95900 331 aaKnown RBP17.08■□□□□ 0.32
IFT20-210ENST00000580357 F9P00740 461 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 PENKP01210 267 aaPredicted RBP17.08■□□□□ 0.32
IFT20-210ENST00000580357 APOEP02649 317 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 MATKP42679 507 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 FMO1Q01740 532 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 ARID5AQ03989 594 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 GAS6Q14393 721 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 NAA35Q5VZE5 725 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 DEFB106AQ8N104 65 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 ATP6V0D2Q8N8Y2 350 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 ZNF557Q8N988 423 aaPredicted RBP17.08■□□□□ 0.32
IFT20-210ENST00000580357 DDI1Q8WTU0 396 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 SLC39A13Q96H72 371 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 AGPAT1Q99943 283 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 DNAJC17Q9NVM6 304 aaKnown RBP17.08■□□□□ 0.32
IFT20-210ENST00000580357 ZSCAN32Q9NX65 697 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.08■□□□□ 0.32
IFT20-210ENST00000580357 AIPL1Q9NZN9 384 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 TJP2Q9UDY2 1190 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 SLC8A2Q9UPR5 921 aa17.08■□□□□ 0.32
IFT20-210ENST00000580357 COL4A3Q01955 1670 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 PROB1E7EW31 1015 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 MSI1O43347 362 aaKnown RBP17.07■□□□□ 0.32
IFT20-210ENST00000580357 CBFA2T2O43439 604 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 TIMM44O43615 452 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 DAB1O75553 588 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 CHRNB2P17787 502 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 TNFAIP3P21580 790 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 MMP8P22894 467 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 NBL1P41271 181 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 DGKGP49619 791 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 EIF4EBP2Q13542 120 aaPredicted RBP17.07■□□□□ 0.32
IFT20-210ENST00000580357 TAF5Q15542 800 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 ACBD5Q5T8D3 534 aaPredicted RBP17.07■□□□□ 0.32
IFT20-210ENST00000580357 SFMBT2Q5VUG0 894 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 FYB2Q5VWT5 728 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 NAIF1Q69YI7 327 aaPredicted RBP17.07■□□□□ 0.32
IFT20-210ENST00000580357 Q6ZS52 159 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms