RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 MSANTD2Q6P1R3 559 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 SLC36A4Q6YBV0 504 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 DENND1CQ8IV53 801 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 UBA3Q8TBC4 463 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 IPO4Q8TEX9 1081 aaKnown RBP12.07□□□□□ -0.48
SSH2-208ENST00000579040 UCMAQ8WVF2 138 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 RLN3Q8WXF3 142 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 IRGQQ8WZA9 623 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 TFAP2BQ92481 460 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 BHMTQ93088 406 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 TCEAL3Q969E4 200 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 ACOX2Q99424 681 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 SLC2A11Q9BYW1 496 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 CD248Q9HCU0 757 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 ABCC13Q9NSE7 274 aa12.07□□□□□ -0.48
SSH2-208ENST00000579040 EVLQ9UI08 416 aaPredicted RBP12.07□□□□□ -0.48
SSH2-208ENST00000579040 MBD1Q9UIS9 605 aaPredicted RBP12.07□□□□□ -0.48
SSH2-208ENST00000579040 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.07□□□□□ -0.48
SSH2-208ENST00000579040 LNP1A1A4G5 178 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 YJEFN3A6XGL0 299 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 E7ENQ6 273 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 M0QYV0 167 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 AP5Z1O43299 807 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 GADD45BO75293 160 aaPredicted RBP12.06□□□□□ -0.48
SSH2-208ENST00000579040 AFPP02771 609 aaKnown RBP12.06□□□□□ -0.48
SSH2-208ENST00000579040 WASP42768 502 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 MFAP3P55082 362 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 DAOAP59103 153 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 KCNH2Q12809 1159 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 ANKS1BQ7Z6G8 1248 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 SYT12Q8IV01 421 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 FMNL3Q8IVF7 1028 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 RBBP8NLQ8NC74 664 aaPredicted RBP12.06□□□□□ -0.48
SSH2-208ENST00000579040 EHBP1Q8NDI1 1231 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 SLC35F5Q8WV83 523 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 NDRG1Q92597 394 aaKnown RBP12.06□□□□□ -0.48
SSH2-208ENST00000579040 PIGKQ92643 395 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 KAT5Q92993 513 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 P2RY11Q96G91 374 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 PIWIL1Q96J94 861 aaKnown RBP12.06□□□□□ -0.48
SSH2-208ENST00000579040 HSFY1Q96LI6 401 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 LSM14BQ9BX40 385 aaKnown RBP12.06□□□□□ -0.48
SSH2-208ENST00000579040 IRX2Q9BZI1 471 aaPredicted RBP12.06□□□□□ -0.48
SSH2-208ENST00000579040 CALCOCO1Q9P1Z2 691 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 STOML2Q9UJZ1 356 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 CNTN6Q9UQ52 1028 aa12.06□□□□□ -0.48
SSH2-208ENST00000579040 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 RNF225M0QZC1 329 aaPredicted RBP12.05□□□□□ -0.48
SSH2-208ENST00000579040 FBXO21O94952 628 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 LCP1P13796 627 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 NDUFV2P19404 249 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 BRD2P25440 801 aaKnown RBP12.05□□□□□ -0.48
SSH2-208ENST00000579040 STX17P56962 302 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 UBE2HP62256 183 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 ENPP2Q13822 863 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 STARD3Q14849 445 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 MEA1Q16626 185 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 MPPE1Q53F39 396 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 DAB2IPQ5VWQ8 1189 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 PEAR1Q5VY43 1037 aaPredicted RBP12.05□□□□□ -0.48
SSH2-208ENST00000579040 LYSMD4Q5XG99 296 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 KIAA1211LQ6NV74 962 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 PMF1Q6P1K2 205 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 RABEPKQ7Z6M1 372 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 ARHGEF19Q8IW93 802 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 TMEFF1Q8IYR6 380 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 DDI1Q8WTU0 396 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 EDEM1Q92611 657 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 GOLGA1Q92805 767 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 ZSWIM1Q9BR11 485 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 SRRTQ9BXP5 876 aaKnown RBP12.05□□□□□ -0.48
SSH2-208ENST00000579040 INTS2Q9H0H0 1204 aaKnown RBP12.05□□□□□ -0.48
SSH2-208ENST00000579040 TMEM9BQ9NQ34 198 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 CACNA2D2Q9NY47 1150 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 THAP10Q9P2Z0 257 aaPredicted RBP12.05□□□□□ -0.48
SSH2-208ENST00000579040 STON1Q9Y6Q2 735 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 PCNX2A6NKB5 2137 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 ADAMTS9Q9P2N4 1935 aa12.05□□□□□ -0.48
SSH2-208ENST00000579040 MUC22E2RYF6 1773 aaPredicted RBP12.05□□□□□ -0.48
SSH2-208ENST00000579040 IGHV1OR15-9A0A0B4J2B8 117 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 SART1O43290 800 aaKnown RBP12.04□□□□□ -0.48
SSH2-208ENST00000579040 TIMM44O43615 452 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 GABBR2O75899 941 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 IGLV3-27P01718 113 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 LTFP02788 710 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 PTGER3P43115 390 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 RGS7P49802 495 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 RPL6Q02878 288 aaKnown RBP12.04□□□□□ -0.48
SSH2-208ENST00000579040 RING1Q06587 406 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 LMAN2Q12907 356 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 GEN1Q17RS7 908 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 ADGRF1Q5T601 910 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 NUGGCQ68CJ6 796 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 SMYD5Q6GMV2 418 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 RRAGAQ7L523 313 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 ENOSF1Q7L5Y1 443 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 METTL3Q86U44 580 aaKnown RBP12.04□□□□□ -0.48
SSH2-208ENST00000579040 UNC45BQ8IWX7 931 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 FRMD1Q8N878 549 aa12.04□□□□□ -0.48
SSH2-208ENST00000579040 CEP76Q8TAP6 659 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms