RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 GCLMP48507 274 aa22.03■■□□□ 1.12
TSEN54-205ENST00000578415 COG7P83436 770 aa22.03■■□□□ 1.12
TSEN54-205ENST00000578415 BNC1Q01954 994 aa22.03■■□□□ 1.12
TSEN54-205ENST00000578415 PPP3CAQ08209 521 aa22.03■■□□□ 1.12
TSEN54-205ENST00000578415 TMPRSS6Q8IU80 811 aa22.03■■□□□ 1.12
TSEN54-205ENST00000578415 RBBP8NLQ8NC74 664 aaPredicted RBP22.03■■□□□ 1.12
TSEN54-205ENST00000578415 IMPG2Q9BZV3 1241 aa22.03■■□□□ 1.12
TSEN54-205ENST00000578415 PCOLCE2Q9UKZ9 415 aa22.03■■□□□ 1.12
TSEN54-205ENST00000578415 AGO1Q9UL18 857 aaKnown RBP22.03■■□□□ 1.12
TSEN54-205ENST00000578415 LAMA5O15230 3695 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 FASNP49327 2511 aaKnown RBP22.02■■□□□ 1.12
TSEN54-205ENST00000578415 MYH10P35580 1976 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 MAPK13O15264 365 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 KIF20AO95235 890 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 F13A1P00488 732 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 IGLV3-19P01714 112 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 HMBSP08397 361 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 ZSCAN22P10073 491 aaPredicted RBP22.02■■□□□ 1.12
TSEN54-205ENST00000578415 PDIA4P13667 645 aaKnown RBP22.02■■□□□ 1.12
TSEN54-205ENST00000578415 COPAP53621 1224 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 EFEMP1Q12805 493 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 ZNF234Q14588 700 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 DCAF12L1Q5VU92 463 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 CCNI2Q6ZMN8 369 aaPredicted RBP22.02■■□□□ 1.12
TSEN54-205ENST00000578415 ANKS1BQ7Z6G8 1248 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 GLRX5Q86SX6 157 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 SLCO6A1Q86UG4 719 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 SIPA1Q96FS4 1042 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 CDK5RAP1Q96SZ6 601 aaKnown RBP22.02■■□□□ 1.12
TSEN54-205ENST00000578415 DCLK3Q9C098 648 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 MIR1-1HGQ9H1L0 117 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 ELOVL2Q9NXB9 296 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 TRAF3IP3Q9Y228 551 aa22.02■■□□□ 1.12
TSEN54-205ENST00000578415 METTL12A8MUP2 240 aa22.01■■□□□ 1.11
TSEN54-205ENST00000578415 SYNCRIPO60506 623 aaKnown RBP22.01■■□□□ 1.11
TSEN54-205ENST00000578415 PRKCHP24723 683 aa22.01■■□□□ 1.11
TSEN54-205ENST00000578415 TMEM215Q68D42 235 aa22.01■■□□□ 1.11
TSEN54-205ENST00000578415 DENND1CQ8IV53 801 aa22.01■■□□□ 1.11
TSEN54-205ENST00000578415 SPRYD3Q8NCJ5 442 aa22.01■■□□□ 1.11
TSEN54-205ENST00000578415 UCMAQ8WVF2 138 aa22.01■■□□□ 1.11
TSEN54-205ENST00000578415 SORCS1Q8WY21 1168 aa22.01■■□□□ 1.11
TSEN54-205ENST00000578415 PRCCQ92733 491 aaPredicted RBP22.01■■□□□ 1.11
TSEN54-205ENST00000578415 FNDC3AQ9Y2H6 1198 aaKnown RBP22.01■■□□□ 1.11
TSEN54-205ENST00000578415 GPSM3Q9Y4H4 160 aa22.01■■□□□ 1.11
TSEN54-205ENST00000578415 BCAT2O15382 392 aaPredicted RBP22■■□□□ 1.11
TSEN54-205ENST00000578415 CALUO43852 315 aaPredicted RBP22■■□□□ 1.11
TSEN54-205ENST00000578415 OXTRP30559 389 aa22■■□□□ 1.11
TSEN54-205ENST00000578415 ACAP1Q15027 740 aa22■■□□□ 1.11
TSEN54-205ENST00000578415 EIF4HQ15056 248 aaKnown RBP22■■□□□ 1.11
TSEN54-205ENST00000578415 ZNF394Q53GI3 561 aa22■■□□□ 1.11
TSEN54-205ENST00000578415 CACUL1Q86Y37 369 aa22■■□□□ 1.11
TSEN54-205ENST00000578415 C1orf216Q8TAB5 229 aa22■■□□□ 1.11
TSEN54-205ENST00000578415 GAREM1Q9H706 876 aa22■■□□□ 1.11
TSEN54-205ENST00000578415 MARCH2Q9P0N8 246 aa22■■□□□ 1.11
TSEN54-205ENST00000578415 APOBEC2Q9Y235 224 aaKnown RBP22■■□□□ 1.11
TSEN54-205ENST00000578415 ITPR1Q14643 2758 aa22■■□□□ 1.11
TSEN54-205ENST00000578415 ZNF883P0CG24 379 aa21.99■■□□□ 1.11
TSEN54-205ENST00000578415 NR2F2P24468 414 aa21.99■■□□□ 1.11
TSEN54-205ENST00000578415 ATL3Q6DD88 541 aa21.99■■□□□ 1.11
TSEN54-205ENST00000578415 INTS8Q75QN2 995 aaKnown RBP21.99■■□□□ 1.11
TSEN54-205ENST00000578415 FAM217AQ8IXS0 508 aa21.99■■□□□ 1.11
TSEN54-205ENST00000578415 CPXM2Q8N436 756 aa21.99■■□□□ 1.11
TSEN54-205ENST00000578415 BAHD1Q8TBE0 780 aaPredicted RBP21.99■■□□□ 1.11
TSEN54-205ENST00000578415 NUP58Q9BVL2 599 aa21.99■■□□□ 1.11
TSEN54-205ENST00000578415 CIPCQ9C0C6 399 aa21.99■■□□□ 1.11
TSEN54-205ENST00000578415 EIF2B4Q9UI10 523 aaKnown RBP21.99■■□□□ 1.11
TSEN54-205ENST00000578415 RCOR1Q9UKL0 485 aa21.99■■□□□ 1.11
TSEN54-205ENST00000578415 SLCO1B1Q9Y6L6 691 aa21.99■■□□□ 1.11
TSEN54-205ENST00000578415 CYBBP04839 570 aa21.98■■□□□ 1.11
TSEN54-205ENST00000578415 MATKP42679 507 aa21.98■■□□□ 1.11
TSEN54-205ENST00000578415 DNM1Q05193 864 aaKnown RBP21.98■■□□□ 1.11
TSEN54-205ENST00000578415 PKP1Q13835 747 aa21.98■■□□□ 1.11
TSEN54-205ENST00000578415 NFIL3Q16649 462 aa21.98■■□□□ 1.11
TSEN54-205ENST00000578415 HLA-BQ31612 363 aa21.98■■□□□ 1.11
TSEN54-205ENST00000578415 RAB41Q5JT25 222 aa21.98■■□□□ 1.11
TSEN54-205ENST00000578415 C19orf48Q6RUI8 117 aa21.98■■□□□ 1.11
TSEN54-205ENST00000578415 PIGZQ86VD9 579 aa21.98■■□□□ 1.11
TSEN54-205ENST00000578415 SETD7Q8WTS6 366 aaKnown RBP21.98■■□□□ 1.11
TSEN54-205ENST00000578415 HEXIM2Q96MH2 286 aaKnown RBP21.98■■□□□ 1.11
TSEN54-205ENST00000578415 SLC2A11Q9BYW1 496 aa21.98■■□□□ 1.11
TSEN54-205ENST00000578415 MMRN2Q9H8L6 949 aa21.98■■□□□ 1.11
TSEN54-205ENST00000578415 TM7SF3Q9NS93 570 aa21.98■■□□□ 1.11
TSEN54-205ENST00000578415 TOR4AQ9NXH8 423 aa21.98■■□□□ 1.11
TSEN54-205ENST00000578415 SLC12A8A0AV02 714 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 CER1O95813 267 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 EPHX1P07099 455 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 CENPBP07199 599 aaPredicted RBP21.97■■□□□ 1.11
TSEN54-205ENST00000578415 ACADMP11310 421 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 PFKFB1P16118 471 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 ENPEPQ07075 957 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 IL27RAQ6UWB1 636 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 SERPINA13PQ6UXR4 307 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 DBX2Q6ZNG2 339 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 FAM186BQ8IYM0 893 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 ARHGAP18Q8N392 663 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 SLC4A11Q8NBS3 891 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 SEMA4DQ92854 862 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 UBXN6Q9BZV1 441 aa21.97■■□□□ 1.11
TSEN54-205ENST00000578415 CCDC86Q9H6F5 360 aaKnown RBP21.97■■□□□ 1.11
TSEN54-205ENST00000578415 TMEM8AQ9HCN3 771 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms