RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 GPRIN1Q7Z2K8 1008 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 LYSMD3Q7Z3D4 306 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 DNAJB7Q7Z6W7 309 aaPredicted RBP8.38□□□□□ -1.07
COPS3-215ENST00000578317 SLFN11Q7Z7L1 901 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 ITIH5Q86UX2 942 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 ARHGAP18Q8N392 663 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 SCAMP5Q8TAC9 235 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 ZNF564Q8TBZ8 553 aaPredicted RBP8.38□□□□□ -1.07
COPS3-215ENST00000578317 UBXN4Q92575 508 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 NT5C3BQ969T7 300 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 PSMG2Q969U7 264 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 HSH2DQ96JZ2 352 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 SELENOOQ9BVL4 669 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 NUP85Q9BW27 656 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 ULBP1Q9BZM6 244 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 TGIF2Q9GZN2 237 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 TLE6Q9H808 572 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 LZTFL1Q9NQ48 299 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 ZDHHC7Q9NXF8 308 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 RRN3Q9NYV6 651 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 CLIC5Q9NZA1 410 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 CTTNBP2NLQ9P2B4 639 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 GMPR2Q9P2T1 348 aaKnown RBP8.38□□□□□ -1.07
COPS3-215ENST00000578317 YIPF1Q9Y548 306 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 PCDHGC5Q9Y5F6 944 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 INSL5Q9Y5Q6 135 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 HCFC2Q9Y5Z7 792 aa8.38□□□□□ -1.07
COPS3-215ENST00000578317 SLC38A8A6NNN8 435 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 KIF5CO60282 957 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 ENDOD1O94919 500 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 FYNP06241 537 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 C8AP07357 584 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 USP17L7P0C7H9 530 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 RHOQP17081 205 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 MSNP26038 577 aaKnown RBP8.37□□□□□ -1.07
COPS3-215ENST00000578317 MAN1A1P33908 653 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 CA8P35219 290 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 SLC1A1P43005 524 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 NOP2P46087 812 aaKnown RBP8.37□□□□□ -1.07
COPS3-215ENST00000578317 GPR15P49685 360 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 CDR1P51861 262 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 ZNF143P52747 638 aaPredicted RBP8.37□□□□□ -1.07
COPS3-215ENST00000578317 RPL7AP62424 266 aaKnown RBP8.37□□□□□ -1.07
COPS3-215ENST00000578317 TWF1Q12792 350 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 PIGHQ14442 188 aaPredicted RBP8.37□□□□□ -1.07
COPS3-215ENST00000578317 VEPH1Q14D04 833 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 TAF5Q15542 800 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 FAM102AQ5T9C2 384 aaPredicted RBP8.37□□□□□ -1.07
COPS3-215ENST00000578317 DCUN1D2Q6PH85 259 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 XKR5Q6UX68 686 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 SYCE1Q8N0S2 351 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 NIPA2Q8N8Q9 360 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 LRRC57Q8N9N7 239 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 PDZD8Q8NEN9 1154 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 CMASQ8NFW8 434 aaPredicted RBP8.37□□□□□ -1.07
COPS3-215ENST00000578317 TRIM58Q8NG06 486 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 SLC7A14Q8TBB6 771 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 CENPIQ92674 756 aaPredicted RBP8.37□□□□□ -1.07
COPS3-215ENST00000578317 SLC2A13Q96QE2 648 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 NCAPGQ9BPX3 1015 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 DDX23Q9BUQ8 820 aaKnown RBP8.37□□□□□ -1.07
COPS3-215ENST00000578317 NSUN3Q9H649 340 aaKnown RBP8.37□□□□□ -1.07
COPS3-215ENST00000578317 POPDC2Q9HBU9 364 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 NEUROD4Q9HD90 331 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 OSGEPQ9NPF4 335 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 ABCC13Q9NSE7 274 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 UXTQ9UBK9 157 aaPredicted RBP8.37□□□□□ -1.07
COPS3-215ENST00000578317 TRIM10Q9UDY6 481 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 IP6K2Q9UHH9 426 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 GUCA1BQ9UMX6 200 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 PAXBP1Q9Y5B6 917 aa8.37□□□□□ -1.07
COPS3-215ENST00000578317 MACROD2A1Z1Q3 448 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 YJEFN3A6XGL0 299 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 E7ENQ6 273 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 GOLGA8SH3BPF8 625 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 RFXAPO00287 272 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 PIK3R2O00459 728 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 SOX1O00570 391 aaPredicted RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 PER2O15055 1255 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 NCK2O43639 380 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 TNFRSF21O75509 655 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 SOAT2O75908 522 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 PROSCO94903 275 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 LRG1P02750 347 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 LTFP02788 710 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 SPATA31D3P0C874 917 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 PDGFRAP16234 1089 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 MATKP42679 507 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 PTPN9P43378 593 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 EPHA5P54756 1037 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 ETF1P62495 437 aaKnown RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 TAF10Q12962 218 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 PABPC1LQ4VXU2 614 aaKnown RBP8.36□□□□□ -1.07
COPS3-215ENST00000578317 SDHAF4Q5VUM1 108 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 BSPRYQ5W0U4 402 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 C11orf63Q6NUN7 778 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 LLGL2Q6P1M3 1020 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 SPATA31D4Q6ZUB0 917 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 ADGRD2Q7Z7M1 963 aa8.36□□□□□ -1.07
COPS3-215ENST00000578317 SCD5Q86SK9 330 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms