RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 INSL5Q9Y5Q6 135 aa19.26■□□□□ 0.67
PRKCA-203ENST00000578063 H3BRJ5 948 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 APOL1O14791 398 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 LIASO43766 372 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 RARGP13631 454 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 ZFXP17010 805 aaPredicted RBP19.25■□□□□ 0.67
PRKCA-203ENST00000578063 TGM2P21980 687 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 LMNB2Q03252 620 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 NNTQ13423 1086 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 SNX1Q13596 522 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 SLC9A4Q6AI14 798 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 SYDE1Q6ZW31 735 aaPredicted RBP19.25■□□□□ 0.67
PRKCA-203ENST00000578063 ATL2Q8NHH9 583 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 RNF34Q969K3 372 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 TRMT2BQ96GJ1 504 aaKnown RBP19.25■□□□□ 0.67
PRKCA-203ENST00000578063 MYRFLQ96LU7 910 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 SAMD11Q96NU1 681 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 CSPG4P5Q96PW8 444 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 C17orf80Q9BSJ5 609 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 EPB41L5Q9HCM4 733 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 ALG13Q9NP73 1137 aaKnown RBP19.25■□□□□ 0.67
PRKCA-203ENST00000578063 ZMYND10O75800 440 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 GAS8O95995 478 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 CCR1P32246 355 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 BYSLQ13895 437 aaKnown RBP19.25■□□□□ 0.67
PRKCA-203ENST00000578063 PPP2R5DQ14738 602 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 TAF12Q16514 161 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 TADA2BQ86TJ2 420 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 PCDH19Q8TAB3 1148 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 ACTL9Q8TC94 416 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 SPPL3Q8TCT6 385 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 POF1BQ8WVV4 589 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 NKD2Q969F2 451 aaPredicted RBP19.25■□□□□ 0.67
PRKCA-203ENST00000578063 KLHL5Q96PQ7 755 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 TKTL2Q9H0I9 626 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 TLR9Q9NR96 1032 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 ARHGEF38Q9NXL2 777 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 SFMBT1Q9UHJ3 866 aa19.25■□□□□ 0.67
PRKCA-203ENST00000578063 BHMG1C9JSJ3 638 aaPredicted RBP19.24■□□□□ 0.67
PRKCA-203ENST00000578063 TGM5O43548 720 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 HMGA1P17096 107 aaKnown RBP19.24■□□□□ 0.67
PRKCA-203ENST00000578063 KCNJ1P48048 391 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 EPHB3P54753 998 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 VCPP55072 806 aaKnown RBP19.24■□□□□ 0.67
PRKCA-203ENST00000578063 OTUD4Q01804 1114 aaKnown RBP19.24■□□□□ 0.67
PRKCA-203ENST00000578063 TWF1Q12792 350 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 SHHQ15465 462 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 MAP9Q49MG5 647 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 SNX30Q5VWJ9 437 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 PYROXD2Q8N2H3 581 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 ZNF276Q8N554 614 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 PQLC3Q8N755 202 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 SLC35B2Q8TB61 432 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 SEC14L1Q92503 715 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 HAUS1Q96CS2 278 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 CCDC114Q96M63 670 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 ERP44Q9BS26 406 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 PLEKHA4Q9H4M7 779 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 CWC15Q9P013 229 aaKnown RBP19.24■□□□□ 0.67
PRKCA-203ENST00000578063 TLR6Q9Y2C9 796 aa19.24■□□□□ 0.67
PRKCA-203ENST00000578063 PLXNA4Q9HCM2 1894 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 MSI1O43347 362 aaKnown RBP19.23■□□□□ 0.67
PRKCA-203ENST00000578063 LPXNO60711 386 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 SLC2A3P11169 496 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 GOT1P17174 413 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 ERVFC1P60507 584 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 SEMA3BQ13214 749 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 CUL1Q13616 776 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 CCDC149Q6ZUS6 474 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 ITIH5Q86UX2 942 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 MRPL43Q8N983 215 aaKnown RBP19.23■□□□□ 0.67
PRKCA-203ENST00000578063 EIF1ADQ8N9N8 165 aaKnown RBP19.23■□□□□ 0.67
PRKCA-203ENST00000578063 HNRNPLLQ8WVV9 542 aaKnown RBP19.23■□□□□ 0.67
PRKCA-203ENST00000578063 P3H4Q92791 437 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 ZNF512Q96ME7 567 aaPredicted RBP19.23■□□□□ 0.67
PRKCA-203ENST00000578063 FAM118BQ9BPY3 351 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 TRIM51Q9BSJ1 452 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 ANLNQ9NQW6 1124 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 TMPRSS4Q9NRS4 437 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 UXTQ9UBK9 157 aaPredicted RBP19.23■□□□□ 0.67
PRKCA-203ENST00000578063 NUDT5Q9UKK9 219 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 DNPEPQ9ULA0 475 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 DRG1Q9Y295 367 aaKnown RBP19.23■□□□□ 0.67
PRKCA-203ENST00000578063 PCDHA11Q9Y5I1 949 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 GREB1Q4ZG55 1949 aa19.23■□□□□ 0.67
PRKCA-203ENST00000578063 ZSCAN5CA6NGD5 496 aaPredicted RBP19.22■□□□□ 0.67
PRKCA-203ENST00000578063 C2orf71A6NGG8 1288 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 EEF2KO00418 725 aaKnown RBP19.22■□□□□ 0.67
PRKCA-203ENST00000578063 MCF2LO15068 1137 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 CA3P07451 260 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 MYOGP15173 224 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 PPP3CCP48454 512 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 CLCN6P51797 869 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 EFEMP1Q12805 493 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 PPP1R7Q15435 360 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 C10orf120Q5SQS8 335 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 PLPP4Q5VZY2 271 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 LILRA6Q6PI73 481 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 CCNI2Q6ZMN8 369 aaPredicted RBP19.22■□□□□ 0.67
PRKCA-203ENST00000578063 PLD5Q8N7P1 536 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms