RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 ZNF445P59923 1031 aa13□□□□□ -0.33
CSNK1D-206ENST00000577578 EXOC3L4Q17RC7 722 aa13□□□□□ -0.33
CSNK1D-206ENST00000577578 RSPO4Q2I0M5 234 aaPredicted RBP13□□□□□ -0.33
CSNK1D-206ENST00000577578 CT47A1Q5JQC4 288 aaPredicted RBP13□□□□□ -0.33
CSNK1D-206ENST00000577578 EGFLAMQ63HQ2 1017 aa13□□□□□ -0.33
CSNK1D-206ENST00000577578 PRR23CQ6ZRP0 262 aa13□□□□□ -0.33
CSNK1D-206ENST00000577578 BEND5Q7L4P6 421 aa13□□□□□ -0.33
CSNK1D-206ENST00000577578 ZNF606Q8WXB4 792 aa13□□□□□ -0.33
CSNK1D-206ENST00000577578 SHC3Q92529 594 aa13□□□□□ -0.33
CSNK1D-206ENST00000577578 GABRG3Q99928 467 aa13□□□□□ -0.33
CSNK1D-206ENST00000577578 SLC4A5Q9BY07 1137 aa13□□□□□ -0.33
CSNK1D-206ENST00000577578 DCLK1O15075 740 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 SART1O43290 800 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 MED7O43513 233 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 RHOBTB1O94844 696 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 LTFP02788 710 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 KRT5P13647 590 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 PRKCSHP14314 528 aaPredicted RBP12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 P2RY2P41231 377 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 HARS2P49590 506 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 RING1Q06587 406 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 ENPP2Q13822 863 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 ELF2Q15723 593 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 MAN2A1Q16706 1144 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 MIIPQ5JXC2 388 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 PMS2CLQ68D20 193 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 RNF43Q68DV7 783 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 DPY19L2P1Q6NXN4 242 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 GJB7Q6PEY0 223 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 RBM43Q6ZSC3 357 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 TMEM110Q86TL2 294 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 FAM114A1Q8IWE2 563 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 CLEC4CQ8WTT0 213 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 BHMTQ93088 406 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 AZIN2Q96A70 460 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 PIWIL1Q96J94 861 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 ACOX2Q99424 681 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 SLC2A11Q9BYW1 496 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 IRX2Q9BZI1 471 aaPredicted RBP12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 TPSD1Q9BZJ3 242 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 ARRDC1-AS1Q9H2J1 176 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 SIX2Q9NPC8 291 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 ACP6Q9NPH0 428 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 PLK2Q9NYY3 685 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 SFMBT1Q9UHJ3 866 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 DACH1Q9UI36 760 aa12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-206ENST00000577578 TCRBV21S2A2A0A5A6 115 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 PIK3R2O00459 728 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 NPC1O15118 1278 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 MSI1O43347 362 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 LETM1O95202 739 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 CYBBP04839 570 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 HOXB2P14652 356 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 GABRG2P18507 467 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 HOXD9P28356 352 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 GNA15P30679 374 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 MPLP40238 635 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 ACADSBP45954 432 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 MTIF2P46199 727 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 APBA1Q02410 837 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 NNTQ13423 1086 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 EIF4HQ15056 248 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 GEN1Q17RS7 908 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 MAP7D1Q3KQU3 841 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 MPPE1Q53F39 396 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 ADGRF1Q5T601 910 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 DENND1BQ6P3S1 775 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 SCUBE3Q8IX30 993 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 CHPFQ8IZ52 775 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 NETO1Q8TDF5 533 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 NDST4Q9H3R1 872 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 CYTH4Q9UIA0 394 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 CDV3Q9UKY7 258 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 CLEC4EQ9ULY5 219 aa12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 MUC22E2RYF6 1773 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-206ENST00000577578 BCLAF3A2AJT9 711 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 SLC30A4O14863 429 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 PAPSS1O43252 624 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 THAP12O43422 761 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 BCKDHBP21953 392 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 LIMK1P53667 647 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 ATXN1P54253 815 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 PDCLQ13371 301 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 TPD52L1Q16890 204 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 VWA3BQ502W6 1294 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 SPDYCQ5MJ68 293 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 MPP7Q5T2T1 576 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 NUGGCQ68CJ6 796 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 SDE2Q6IQ49 451 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 DGLUCYQ7Z3D6 616 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 ANKS1BQ7Z6G8 1248 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 CREBRFQ8IUR6 639 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 UNC45BQ8IWX7 931 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 IPO4Q8TEX9 1081 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 HMGB4Q8WW32 186 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 GOLGA1Q92805 767 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 SLC39A13Q96H72 371 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 TUBGCP2Q9BSJ2 902 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 RTKNQ9BST9 563 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms