RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 STN1Q9H668 368 aaKnown RBP13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 PIH1D1Q9NWS0 290 aaKnown RBP13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 LRRC42Q9Y546 428 aa13.48□□□□□ -0.25
PCDHGB3-201ENST00000576222 IFT172Q9UG01 1749 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 CFAP99D6REC4 459 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 TBX10O75333 385 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 PSMD10O75832 226 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 FGFR3P22607 806 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 EIF4BP23588 611 aaKnown RBP13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 USP46P62068 366 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 CHRNB3Q05901 458 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 FASTKD3Q14CZ7 662 aaKnown RBP13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 NFIL3Q16649 462 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 TRIM60Q495X7 471 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 ARMC3Q5W041 872 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 TAF2Q6P1X5 1199 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 BBS12Q6ZW61 710 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 SHCBP1Q8NEM2 672 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 AP4E1Q9UPM8 1137 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 MYH10P35580 1976 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 NR5A2O00482 541 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 BIRC5O15392 142 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 CYP2C8P10632 490 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 MGAT1P26572 445 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 PPM1FP49593 454 aaPredicted RBP13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 HADHBP55084 474 aaKnown RBP13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 MTMR2Q13614 643 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 LINC00523Q86TU6 105 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 TDRPQ86YL5 185 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 UNC45BQ8IWX7 931 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 DHRSXQ8N5I4 330 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 ATPAF2Q8N5M1 289 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 EGFL8Q99944 293 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 SP110Q9HB58 689 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 CACYBPQ9HB71 228 aaKnown RBP13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 GGA3Q9NZ52 723 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 POLLQ9UGP5 575 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 PSMD13Q9UNM6 376 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 PPME1Q9Y570 386 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 DDTLA6NHG4 134 aaPredicted RBP13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 MRASO14807 208 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 CBFA2T3O75081 653 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 CCDC130P13994 396 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 RAP1GAPP47736 663 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 MAPK10P53779 464 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 GTF2BQ00403 316 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 CYP1B1Q16678 543 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 CNPY1Q3B7I2 92 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 GIPC3Q8TF64 312 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 C10orf82Q8WW14 230 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 FAM162AQ96A26 154 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 MYO1GB0I1T2 1018 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 TPP1O14773 563 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 PHGDHO43175 533 aaKnown RBP13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 CSPG5O95196 566 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 VIL1P09327 827 aaKnown RBP13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 ITGADQ13349 1161 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 PCDH20Q8N6Y1 951 aaKnown RBP13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 FAM163AQ96GL9 167 aaPredicted RBP13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 WRNIP1Q96S55 665 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 TEX13BQ9BXU2 312 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 TMEM165Q9HC07 324 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 KIAA1257Q9ULG3 409 aa13.47□□□□□ -0.25
PCDHGB3-201ENST00000576222 RGSL1A5PLK6 1076 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 PIGNO95427 931 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 RAB27AP51159 221 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 NOMO3P69849 1222 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 FASTKQ14296 549 aaKnown RBP13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 DMC1Q14565 340 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 ANO4Q32M45 955 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 SAMD4BQ5PRF9 694 aaKnown RBP13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 DPP9Q86TI2 863 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 P3H2Q8IVL5 708 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 NMRAL1Q9HBL8 299 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 TRPC7Q9HCX4 862 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 ETNK2Q9NVF9 386 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 HACD3Q9P035 362 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 MAP3K13O43283 966 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 PGAM1P18669 254 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 PTPN7P35236 360 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 NFYCQ13952 458 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 SUPT20HL1Q3ZLR7 823 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 LLGL2Q6P1M3 1020 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 CES3Q6UWW8 571 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 PHF13Q86YI8 300 aaPredicted RBP13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 FAM151AQ8WW52 585 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 MBOAT7Q96N66 472 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 TIMMDC1Q9NPL8 285 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 MAN1C1Q9NR34 630 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 KCNQ5Q9NR82 932 aa13.46□□□□□ -0.25
PCDHGB3-201ENST00000576222 MMRN1Q13201 1228 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 PCSK7Q16549 785 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 OTUD3Q5T2D3 398 aaPredicted RBP13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 IL31Q6EBC2 164 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 ERO1BQ86YB8 467 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 SLC7A14Q8TBB6 771 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 TMEM176AQ96HP8 235 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 TBCBQ99426 244 aa13.46□□□□□ -0.26
PCDHGB3-201ENST00000576222 CPNE1Q99829 537 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms