RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ADGRG1Q9Y653 693 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 F5P12259 2224 aa8.25□□□□□ -1.09
CCDC40-215ENST00000576033 NYNRINQ9P2P1 1898 aaKnown RBP8.24□□□□□ -1.09
CCDC40-215ENST00000576033 A0A087X0T9 212 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 TCRBV5S1A1TA0A578 114 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 GOLGA6L9A6NEM1 432 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 SOWAHDA6NJG2 315 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 SPECC1L-ADORA2AF8WAN1 911 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 IRAK2O43187 625 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 ZSCAN12O43309 604 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 TSPAN3O60637 253 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 FBXO21O94952 628 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 IGLV3-25P01717 112 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 FAM228BP0C875 321 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 MMP8P22894 467 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 SLC6A4P31645 630 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 PRKCIP41743 596 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 ACADSBP45954 432 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 GABRB2P47870 512 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 SLC6A11P48066 632 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 PPP3CCP48454 512 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 SULT1E1P49888 294 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 BPIFB4P59827 614 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 SLC6A3Q01959 620 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 GFPT1Q06210 699 aaPredicted RBP8.24□□□□□ -1.09
CCDC40-215ENST00000576033 ZNF252P-AS1Q0IIN9 211 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 NME3Q13232 169 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 PON2Q15165 354 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 CDO1Q16878 200 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 ARHGAP29Q52LW3 1261 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 LY6G5CQ5SRR4 150 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 MSANTD2Q6P1R3 559 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 RFWD3Q6PCD5 774 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 RHBDF2Q6PJF5 856 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 TOGARAM2Q6ZUX3 1019 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 ZNF677Q86XU0 584 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 CCDC105Q8IYK2 499 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 UBALD2Q8IYN6 164 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 ZNF687Q8N1G0 1237 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 SCML4Q8N228 414 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 NAT16Q8N8M0 369 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 WFDC5Q8TCV5 224 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 IPO4Q8TEX9 1081 aaKnown RBP8.24□□□□□ -1.09
CCDC40-215ENST00000576033 RNF139Q8WU17 664 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 IRGQQ8WZA9 623 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 C18orf8Q96DM3 657 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 ARHGEF26Q96DR7 871 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 BTBD6Q96KE9 485 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 PRICKLE1Q96MT3 831 aaPredicted RBP8.24□□□□□ -1.09
CCDC40-215ENST00000576033 MCEEQ96PE7 176 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 NUCKS1Q9H1E3 243 aaKnown RBP8.24□□□□□ -1.09
CCDC40-215ENST00000576033 ECT2Q9H8V3 914 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 FAM204AQ9H8W3 233 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 ABCC13Q9NSE7 274 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 PIGVQ9NUD9 493 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 OBP2AQ9NY56 170 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 TMEM59LQ9UK28 342 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 AGO1Q9UL18 857 aaKnown RBP8.24□□□□□ -1.09
CCDC40-215ENST00000576033 NENFQ9UMX5 172 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 LUC7L2Q9Y383 392 aaKnown RBP8.24□□□□□ -1.09
CCDC40-215ENST00000576033 SH3BP1Q9Y3L3 701 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 CEP83Q9Y592 693 aa8.24□□□□□ -1.09
CCDC40-215ENST00000576033 NEDD8-MDP1E9PL57 170 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 CAPN9O14815 690 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 FANCGO15287 622 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 HSF2BPO75031 334 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 LCA5LO95447 670 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 TRUB2O95900 331 aaKnown RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 EGFP01133 1207 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 IGLV3-27P01718 113 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 ALADP13716 330 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 TNNT1P13805 278 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 TCF3P15923 654 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 ABCB4P21439 1286 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 TNFAIP3P21580 790 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 CTHP32929 405 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 GJA4P35212 333 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 EIF4A3P38919 411 aaKnown RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 OPRD1P41143 372 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 NSFP46459 744 aaKnown RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 PSEN1P49768 467 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 KPNA1P52294 538 aaPredicted RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 TBX4P57082 545 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 RPL7AP62424 266 aaKnown RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 YWHAZP63104 245 aaKnown RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 ATP11AP98196 1134 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 RUNX3Q13761 415 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 UBXN2BQ14CS0 331 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 DHCR24Q15392 516 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 TRIP4Q15650 581 aaPredicted RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 FAM133BQ5BKY9 247 aaKnown RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 ZC3H12AQ5D1E8 599 aaKnown RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 ASTLQ6HA08 431 aaPredicted RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 ACAD10Q6JQN1 1059 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 FSTL4Q6MZW2 842 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 CC2D1AQ6P1N0 951 aaPredicted RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 KLHDC10Q6PID8 442 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 SLC26A9Q7LBE3 791 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 PHF13Q86YI8 300 aaPredicted RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 MCOLN2Q8IZK6 566 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms