RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 QKIQ96PU8 341 aaKnown RBP eCLIP24.5■■□□□ 1.514e-8■■□□□ 11.6
NPLOC4-217ENST00000574897 XPNPEP3Q9NQH7 507 aa24.5■■□□□ 1.51
NPLOC4-217ENST00000574897 ANLNQ9NQW6 1124 aa24.5■■□□□ 1.51
NPLOC4-217ENST00000574897 ABCF3Q9NUQ8 709 aa24.5■■□□□ 1.51
NPLOC4-217ENST00000574897 CA12O43570 354 aa24.5■■□□□ 1.51
NPLOC4-217ENST00000574897 CREB3O43889 395 aa24.5■■□□□ 1.51
NPLOC4-217ENST00000574897 NOS2P35228 1153 aa24.5■■□□□ 1.51
NPLOC4-217ENST00000574897 ACTN3Q08043 901 aaPredicted RBP24.5■■□□□ 1.51
NPLOC4-217ENST00000574897 ITIH4Q14624 930 aa24.5■■□□□ 1.51
NPLOC4-217ENST00000574897 FBXW10Q5XX13 1052 aa24.5■■□□□ 1.51
NPLOC4-217ENST00000574897 CEP41Q9BYV8 373 aa24.5■■□□□ 1.51
NPLOC4-217ENST00000574897 SHROOM3Q8TF72 1996 aa24.5■■□□□ 1.51
NPLOC4-217ENST00000574897 I6L893 689 aaPredicted RBP24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 SEPT4O43236 478 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 USP17L7P0C7H9 530 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 ARL4AP40617 200 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 SREBF2Q12772 1141 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 RASA2Q15283 850 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 ZNF534Q76KX8 674 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 BNIPLQ7Z465 357 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 SPC25Q9HBM1 224 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 POPDC2Q9HBU9 364 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 FAM155BO75949 473 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 ELNP15502 786 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 BRCC3P46736 316 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 IL9RQ01113 521 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 UPP1Q16831 310 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 MPP5Q8N3R9 675 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 RNF139Q8WU17 664 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 SLC2A13Q96QE2 648 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 RTP3Q9BQQ7 232 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 CHST12Q9NRB3 414 aa24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 ABT1Q9ULW3 272 aaKnown RBP24.49■■□□□ 1.51
NPLOC4-217ENST00000574897 TTC3P53804 2025 aa24.48■■□□□ 1.51
NPLOC4-217ENST00000574897 DEUP1Q05D60 604 aa24.48■■□□□ 1.51
NPLOC4-217ENST00000574897 DNAJC3Q13217 504 aa24.48■■□□□ 1.51
NPLOC4-217ENST00000574897 SLC7A14Q8TBB6 771 aa24.48■■□□□ 1.51
NPLOC4-217ENST00000574897 OLFM3Q96PB7 478 aa24.48■■□□□ 1.51
NPLOC4-217ENST00000574897 CYTH2Q99418 400 aa24.48■■□□□ 1.51
NPLOC4-217ENST00000574897 PPCSQ9HAB8 311 aa24.48■■□□□ 1.51
NPLOC4-217ENST00000574897 FETUBQ9UGM5 382 aa24.48■■□□□ 1.51
NPLOC4-217ENST00000574897 USP15Q9Y4E8 981 aaPredicted RBP24.48■■□□□ 1.51
NPLOC4-217ENST00000574897 TTLL3Q9Y4R7 772 aa24.48■■□□□ 1.51
NPLOC4-217ENST00000574897 FAM72CH0Y354 149 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 CPP00450 1065 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 ATP2A2P16615 1042 aaKnown RBP24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 ZFXP17010 805 aaPredicted RBP24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 DAOAP59103 153 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 XRCC4Q13426 336 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 FAM72AQ5TYM5 149 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 HEATR6Q6AI08 1181 aaKnown RBP24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 FAM72DQ6L9T8 149 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 DENND5BQ6ZUT9 1274 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 FAM72BQ86X60 149 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 HACE1Q8IYU2 909 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 THOC1Q96FV9 657 aaKnown RBP24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 SENP1Q9P0U3 644 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 INPP5FQ9Y2H2 1132 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 GIT1Q9Y2X7 761 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 TLL2Q9Y6L7 1015 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 F8W810 466 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 GPR182O15218 404 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 GCATO75600 419 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 DGKIO75912 1065 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 C1QAP02745 245 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 LHX1P48742 406 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 NR2C2P49116 596 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 VPS52Q8N1B4 723 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 SLCO1B3Q9NPD5 702 aa24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 SMG5Q9UPR3 1016 aaKnown RBP24.47■■□□□ 1.51
NPLOC4-217ENST00000574897 CXorf49A8MYA2 514 aaPredicted RBP24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 PTK7Q13308 1070 aa24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 TRMT13Q9NUP7 481 aaKnown RBP24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 ZC3H7BQ9UGR2 993 aaKnown RBP24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 STAP1Q9ULZ2 295 aa24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 CAPN9O14815 690 aa24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 MAGEA6P43360 314 aa24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 SCTRP47872 440 aa24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 FAAP100Q0VG06 881 aa24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 SPARCL1Q14515 664 aa24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 LVRNQ6Q4G3 990 aa24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 PAXIP1Q6ZW49 1069 aaPredicted RBP24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 SPATA21Q7Z572 469 aa24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 TMEM86AQ8N2M4 240 aa24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 TFB1MQ8WVM0 346 aaKnown RBP24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 HTR3CQ8WXA8 447 aa24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 EDEM1Q92611 657 aa24.46■■□□□ 1.51
NPLOC4-217ENST00000574897 HHLA1C9JL84 531 aa24.45■■□□□ 1.51
NPLOC4-217ENST00000574897 B3GAT3O94766 335 aa24.45■■□□□ 1.51
NPLOC4-217ENST00000574897 TM4SF4P48230 202 aa24.45■■□□□ 1.51
NPLOC4-217ENST00000574897 LPIN1Q14693 890 aa24.45■■□□□ 1.51
NPLOC4-217ENST00000574897 TRPM8Q7Z2W7 1104 aa24.45■■□□□ 1.51
NPLOC4-217ENST00000574897 MRPL10Q7Z7H8 261 aaKnown RBP24.45■■□□□ 1.51
NPLOC4-217ENST00000574897 SERAC1Q96JX3 654 aa24.45■■□□□ 1.51
NPLOC4-217ENST00000574897 TMEM209Q96SK2 561 aa24.45■■□□□ 1.51
NPLOC4-217ENST00000574897 KDM4CQ9H3R0 1056 aa24.45■■□□□ 1.51
NPLOC4-217ENST00000574897 SMYD2Q9NRG4 433 aa24.45■■□□□ 1.51
NPLOC4-217ENST00000574897 PIH1D1Q9NWS0 290 aaKnown RBP24.45■■□□□ 1.51
NPLOC4-217ENST00000574897 PTPRDP23468 1912 aa24.45■■□□□ 1.51
NPLOC4-217ENST00000574897 H0YHG0 523 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms