RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 SLC12A8A0AV02 714 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 I6L893 689 aaPredicted RBP24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 CES2O00748 559 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 ZRANB2O95218 330 aaKnown RBP eCLIP24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 RHOP08100 348 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 CDC25CP30307 473 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 EPHA5P54756 1037 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 NTHL1P78549 312 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 TXNDC8Q6A555 127 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 TMC5Q6UXY8 1006 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 ANKS1BQ7Z6G8 1248 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 GRASPQ7Z6J2 395 aaPredicted RBP24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 KCTD6Q8NC69 237 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 MRPS31Q92665 395 aaKnown RBP24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 GCNAQ96QF7 691 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 RNF38Q9H0F5 515 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 TKTL2Q9H0I9 626 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 TLR6Q9Y2C9 796 aa24.98■■□□□ 1.59
ATPAF1-213ENST00000574428 ANAPC1Q9H1A4 1944 aa24.97■■□□□ 1.59
ATPAF1-213ENST00000574428 CD48P09326 243 aa24.97■■□□□ 1.59
ATPAF1-213ENST00000574428 TBX4P57082 545 aa24.97■■□□□ 1.59
ATPAF1-213ENST00000574428 SEL1L2Q5TEA6 688 aa24.97■■□□□ 1.59
ATPAF1-213ENST00000574428 PDZD4Q76G19 769 aaPredicted RBP24.97■■□□□ 1.59
ATPAF1-213ENST00000574428 RCOR2Q8IZ40 523 aa24.97■■□□□ 1.59
ATPAF1-213ENST00000574428 EFHBQ8N7U6 833 aa24.97■■□□□ 1.59
ATPAF1-213ENST00000574428 CMASQ8NFW8 434 aaPredicted RBP24.97■■□□□ 1.59
ATPAF1-213ENST00000574428 TCEAL4Q96EI5 215 aa24.97■■□□□ 1.59
ATPAF1-213ENST00000574428 DHX35Q9H5Z1 703 aaKnown RBP24.97■■□□□ 1.59
ATPAF1-213ENST00000574428 SFXN1Q9H9B4 322 aa24.97■■□□□ 1.59
ATPAF1-213ENST00000574428 DZANK1Q9NVP4 752 aa24.97■■□□□ 1.59
ATPAF1-213ENST00000574428 HMBSP08397 361 aa24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 ADRA1BP35368 520 aa24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 CDH6P55285 790 aa24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 TRIP4Q15650 581 aaPredicted RBP24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 STXBP5Q5T5C0 1151 aa24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 PRPF38BQ5VTL8 546 aaKnown RBP24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 KLHDC10Q6PID8 442 aa24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 MFSD7Q6UXD7 560 aa24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 SHKBP1Q8TBC3 707 aa24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 SMG7Q92540 1137 aaKnown RBP24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 NTAN1Q96AB6 310 aa24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 LRCH3Q96II8 777 aa24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 RBM41Q96IZ5 413 aaKnown RBP24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 FCRL2Q96LA5 508 aaPredicted RBP24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 FAM161BQ96MY7 647 aa24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 SLC22A12Q96S37 553 aa24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 CYP2S1Q96SQ9 504 aa24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 PIDD1Q9HB75 910 aa24.96■■□□□ 1.59
ATPAF1-213ENST00000574428 C3orf70A6NLC5 250 aaPredicted RBP24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 PDE2AO00408 941 aaPredicted RBP24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 SLU7O95391 586 aaKnown RBP24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 POU2F2P09086 479 aa24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 CCR1P32246 355 aa24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 NNTQ13423 1086 aa24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 TUBB2AQ13885 445 aa24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 KRT81Q14533 505 aa24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 SLC5A9Q2M3M2 681 aa24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 PYROXD2Q8N2H3 581 aa24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 SLC39A13Q96H72 371 aa24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 TUBB2BQ9BVA1 445 aa24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 APOL5Q9BWW9 433 aa24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 LMCD1Q9NZU5 365 aa24.95■■□□□ 1.59
ATPAF1-213ENST00000574428 KDELR1P24390 212 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 ARSEP51690 589 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 ADGRE1Q14246 886 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 WHAMMP3Q1A5X7 153 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 ARL13BQ3SXY8 428 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 PPP6R3Q5H9R7 873 aaPredicted RBP24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 EFHC2Q5JST6 749 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 BRMS1LQ5PSV4 323 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 RARS2Q5T160 578 aaKnown RBP24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 CCDC181Q5TID7 509 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 SPOCD1Q6ZMY3 1216 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 RASGEF1CQ8N431 466 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 ARL14EPQ8N8R7 260 aaPredicted RBP24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 CALN1Q9BXU9 219 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 ARHGEF38Q9NXL2 777 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 MTCH2Q9Y6C9 303 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 REV3LO60673 3130 aa24.95■■□□□ 1.58
ATPAF1-213ENST00000574428 DOCK6Q96HP0 2047 aa24.94■■□□□ 1.58
ATPAF1-213ENST00000574428 FGF19O95750 216 aa24.94■■□□□ 1.58
ATPAF1-213ENST00000574428 MOCS2O96007 188 aaPredicted RBP24.94■■□□□ 1.58
ATPAF1-213ENST00000574428 FGGP02679 453 aa24.94■■□□□ 1.58
ATPAF1-213ENST00000574428 SCAPQ12770 1279 aa24.94■■□□□ 1.58
ATPAF1-213ENST00000574428 PPP2R5DQ14738 602 aa24.94■■□□□ 1.58
ATPAF1-213ENST00000574428 MAB21L3Q8N8X9 362 aa24.94■■□□□ 1.58
ATPAF1-213ENST00000574428 KCTD15Q96SI1 283 aaPredicted RBP24.94■■□□□ 1.58
ATPAF1-213ENST00000574428 HERPUD2Q9BSE4 406 aa24.94■■□□□ 1.58
ATPAF1-213ENST00000574428 HEMGNQ9BXL5 484 aa24.94■■□□□ 1.58
ATPAF1-213ENST00000574428 PCDH18Q9HCL0 1135 aa24.94■■□□□ 1.58
ATPAF1-213ENST00000574428 KCNU1A8MYU2 1149 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 PGRMC1O00264 195 aaKnown RBP24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 MOSPD3O75425 235 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 IGLV3-27P01718 113 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 L1CAMP32004 1257 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 CDKN2BP42772 138 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 AIF1P55008 147 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 MMRN1Q13201 1228 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 DPYSL3Q14195 570 aa24.93■■□□□ 1.58
ATPAF1-213ENST00000574428 TEAD2Q15562 447 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms