RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 MUC22E2RYF6 1773 aaPredicted RBP18.41■□□□□ 0.54
CCDC40-211ENST00000574099 TNFSF14O43557 240 aa18.41■□□□□ 0.54
CCDC40-211ENST00000574099 C4BPAP04003 597 aaKnown RBP18.41■□□□□ 0.54
CCDC40-211ENST00000574099 P4HA1P13674 534 aa18.41■□□□□ 0.54
CCDC40-211ENST00000574099 CASP1P29466 404 aa18.41■□□□□ 0.54
CCDC40-211ENST00000574099 CORO1AP31146 461 aaKnown RBP18.41■□□□□ 0.54
CCDC40-211ENST00000574099 ACSL1P33121 698 aa18.41■□□□□ 0.54
CCDC40-211ENST00000574099 SLC39A14Q15043 492 aa18.41■□□□□ 0.54
CCDC40-211ENST00000574099 E2F4Q16254 413 aa18.41■□□□□ 0.54
CCDC40-211ENST00000574099 BMT2Q1RMZ1 405 aa18.41■□□□□ 0.54
CCDC40-211ENST00000574099 KLHDC10Q6PID8 442 aa18.41■□□□□ 0.54
CCDC40-211ENST00000574099 PDCD7Q8N8D1 485 aaKnown RBP18.41■□□□□ 0.54
CCDC40-211ENST00000574099 PIWIL1Q96J94 861 aaKnown RBP18.41■□□□□ 0.54
CCDC40-211ENST00000574099 ELOVL2Q9NXB9 296 aa18.41■□□□□ 0.54
CCDC40-211ENST00000574099 ANKRD6Q9Y2G4 727 aa18.41■□□□□ 0.54
CCDC40-211ENST00000574099 PCDHA5Q9Y5H7 936 aa18.41■□□□□ 0.54
CCDC40-211ENST00000574099 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.4■□□□□ 0.54
CCDC40-211ENST00000574099 PLK4O00444 970 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 KIF20AO95235 890 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 GRK6P43250 576 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 CCT8P50990 548 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 CLDN6P56747 220 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 SNRPFP62306 86 aaKnown RBP18.4■□□□□ 0.54
CCDC40-211ENST00000574099 ARID5AQ03989 594 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 C19orf57Q0VDD7 668 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 EFEMP1Q12805 493 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 TEAD4Q15561 434 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 SMAD1Q15797 465 aaKnown RBP18.4■□□□□ 0.54
CCDC40-211ENST00000574099 PTPRNQ16849 979 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 SCD5Q86SK9 330 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 CRYBG2Q8N1P7 616 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 ZNF366Q8N895 744 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 PARD3BQ8TEW8 1205 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 TWNKQ96RR1 684 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 UBL7Q96S82 380 aaPredicted RBP18.4■□□□□ 0.54
CCDC40-211ENST00000574099 LHX5Q9H2C1 402 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 BLZF1Q9H2G9 400 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 TM9SF3Q9HD45 589 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 SLC39A2Q9NP94 309 aa18.4■□□□□ 0.54
CCDC40-211ENST00000574099 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.4■□□□□ 0.54
CCDC40-211ENST00000574099 ASXL3Q9C0F0 2248 aa18.39■□□□□ 0.54
CCDC40-211ENST00000574099 CABIN1Q9Y6J0 2220 aa18.39■□□□□ 0.54
CCDC40-211ENST00000574099 H0Y8X5 98 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 CYBBP04839 570 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 PDCP20941 246 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 ITPKBP27987 946 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 CHKAP35790 457 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 ASPAP45381 313 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 AP3M2P53677 418 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 DLG4P78352 724 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 AMPD3Q01432 767 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 TMEM215Q68D42 235 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 TADA2BQ86TJ2 420 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 UNC93AQ86WB7 457 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 DENND1CQ8IV53 801 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 C12orf56Q8IXR9 622 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 RBBP8NLQ8NC74 664 aaPredicted RBP18.39■□□□□ 0.53
CCDC40-211ENST00000574099 OR2T3Q8NH03 318 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 CYFIP2Q96F07 1278 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 HNRNPABQ99729 332 aaKnown RBP18.39■□□□□ 0.53
CCDC40-211ENST00000574099 TFIP11Q9UBB9 837 aaKnown RBP18.39■□□□□ 0.53
CCDC40-211ENST00000574099 FTSJ1Q9UET6 329 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 AGO1Q9UL18 857 aaKnown RBP18.39■□□□□ 0.53
CCDC40-211ENST00000574099 ZNF510Q9Y2H8 683 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 KNL1Q8NG31 2342 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 PLXNA2O75051 1894 aa18.39■□□□□ 0.53
CCDC40-211ENST00000574099 C1QL1O75973 258 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 FSBPO95073 299 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 RALAP11233 206 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 GRIA4P48058 902 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 EIF4HQ15056 248 aaKnown RBP18.38■□□□□ 0.53
CCDC40-211ENST00000574099 STK38Q15208 465 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 SGSM1Q2NKQ1 1148 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 FNDC3BQ53EP0 1204 aaKnown RBP18.38■□□□□ 0.53
CCDC40-211ENST00000574099 KCNT1Q5JUK3 1230 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 UNC13DQ70J99 1090 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 ADAT2Q7Z6V5 191 aaKnown RBP18.38■□□□□ 0.53
CCDC40-211ENST00000574099 ENGASEQ8NFI3 743 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 DDI1Q8WTU0 396 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 CYB5D2Q8WUJ1 264 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 SLC39A7Q92504 469 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 IGSF8Q969P0 613 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 PCED1AQ9H1Q7 454 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 CUEDC2Q9H467 287 aa18.38■□□□□ 0.53
CCDC40-211ENST00000574099 HELZ2Q9BYK8 2649 aaKnown RBP18.37■□□□□ 0.53
CCDC40-211ENST00000574099 STX6O43752 255 aa18.37■□□□□ 0.53
CCDC40-211ENST00000574099 SEMA4FO95754 770 aa18.37■□□□□ 0.53
CCDC40-211ENST00000574099 TRIM21P19474 475 aaKnown RBP18.37■□□□□ 0.53
CCDC40-211ENST00000574099 SYT1P21579 422 aa18.37■□□□□ 0.53
CCDC40-211ENST00000574099 PIK3CAP42336 1068 aa18.37■□□□□ 0.53
CCDC40-211ENST00000574099 KIF11P52732 1056 aa18.37■□□□□ 0.53
CCDC40-211ENST00000574099 COG7P83436 770 aa18.37■□□□□ 0.53
CCDC40-211ENST00000574099 EHHADHQ08426 723 aa18.37■□□□□ 0.53
CCDC40-211ENST00000574099 KNOP1Q1ED39 458 aaKnown RBP18.37■□□□□ 0.53
CCDC40-211ENST00000574099 CCDC186Q7Z3E2 898 aa18.37■□□□□ 0.53
CCDC40-211ENST00000574099 BIRC7Q96CA5 298 aa18.37■□□□□ 0.53
CCDC40-211ENST00000574099 C7orf25Q9BPX7 421 aa18.37■□□□□ 0.53
CCDC40-211ENST00000574099 DCLK3Q9C098 648 aa18.37■□□□□ 0.53
CCDC40-211ENST00000574099 PNPLA8Q9NP80 782 aa18.37■□□□□ 0.53
CCDC40-211ENST00000574099 MORC2Q9Y6X9 1032 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms