RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ADH5P11766 374 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 KRT3P12035 628 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 HNRNPH3P31942 346 aaKnown RBP13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 GJA4P35212 333 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 MAGEA9P43362 315 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 ZNF75DP51815 510 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 GRSF1Q12849 480 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 TAF5Q15542 800 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 ANO4Q32M45 955 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 C2CD6Q53TS8 623 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 E4F1Q66K89 784 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 HGSNATQ68CP4 663 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 NUDT18Q6ZVK8 323 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 MON1BQ7L1V2 547 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 TAC4Q86UU9 113 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 MCOLN2Q8IZK6 566 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 C3orf20Q8ND61 904 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 AZIN2Q96A70 460 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 DNAJC7Q99615 494 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 DEF6Q9H4E7 631 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 LTB4R2Q9NPC1 389 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 DDIT4Q9NX09 232 aa13.29□□□□□ -0.28
TRAPPC1-206ENST00000573989 FAM170AA1A519 330 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 TYW5A2RUC4 315 aaKnown RBP13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 FAM170BA6NMN3 283 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 GOLGA6L6A8MZA4 724 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 GREM1O60565 184 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 MFAP3LO75121 409 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 PDGFBP01127 241 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 IGLV3-27P01718 113 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 MYBL1P10243 752 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 AOC1P19801 751 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 ABCB4P21439 1286 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 CCR1P32246 355 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 EIF2DP41214 584 aaKnown RBP13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 SOX9P48436 509 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 SULT1E1P49888 294 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 LRRC32Q14392 662 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 ARID5BQ14865 1188 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 SLC25A52Q3SY17 297 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 LY6G5CQ5SRR4 150 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 ADGRF1Q5T601 910 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 DNAJC24Q6P3W2 148 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 RHBDF2Q6PJF5 856 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 TPGS1Q6ZTW0 290 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 CPXM2Q8N436 756 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 ATP6V0D2Q8N8Y2 350 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 PJA1Q8NG27 643 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 CCDC26Q8TAB7 109 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 ADAM32Q8TC27 787 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 CD101Q93033 1021 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 WBP2Q969T9 261 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 XPO6Q96QU8 1125 aaKnown RBP13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 P2RY13Q9BPV8 354 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 LRFN3Q9BTN0 628 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 IRX2Q9BZI1 471 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 C11orf16Q9NQ32 467 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 METTL5Q9NRN9 209 aaKnown RBP13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 ABHD10Q9NUJ1 306 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 PARVAQ9NVD7 372 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 ADAMTS1Q9UHI8 967 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 TMEM59LQ9UK28 342 aa13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 AGO1Q9UL18 857 aaKnown RBP13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 NDRG2Q9UN36 371 aaKnown RBP13.28□□□□□ -0.28
TRAPPC1-206ENST00000573989 ZDBF2Q9HCK1 2354 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 SYNJ2BP-COX16A0A087WUM0 186 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 SSU72P8A0A1W2PR75 194 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 OTOL1A6NHN0 477 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 SIGLEC16A6NMB1 481 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 M0QYT0 321 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 DDX3XO00571 662 aaKnown RBP eCLIP13.27□□□□□ -0.295e-28■■■■■ 29.1
TRAPPC1-206ENST00000573989 TRDMT1O14717 391 aaKnown RBP13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 HOXC11O43248 304 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 AP5Z1O43299 807 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 IGLV3-25P01717 112 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 FTLP02792 175 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 KLKB1P03952 638 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 PDGFRAP16234 1089 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 DRD1P21728 446 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 CD72P21854 359 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 SDC4P31431 198 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 ADKP55263 362 aaKnown RBP13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 DEUP1Q05D60 604 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 PTP4A2Q12974 167 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 NME3Q13232 169 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 PON2Q15165 354 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 DGKKQ5KSL6 1271 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 IER5LQ5T953 404 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 DCUN1D2Q6PH85 259 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 PGAP3Q96FM1 320 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 SLC39A13Q96H72 371 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 BTN2A3PQ96KV6 586 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 FCRL2Q96LA5 508 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 BBS2Q9BXC9 721 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 FOXQ1Q9C009 403 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 MARK1Q9P0L2 795 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 COX16Q9P0S2 106 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 STOML2Q9UJZ1 356 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms