RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 C7orf25Q9BPX7 421 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 CIPCQ9C0C6 399 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 BLZF1Q9H2G9 400 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 C6orf106Q9H6K1 298 aaPredicted RBP20.86■□□□□ 0.93
CCDC40-206ENST00000572083 CGNQ9P2M7 1197 aaKnown RBP20.86■□□□□ 0.93
CCDC40-206ENST00000572083 RASAL2Q9UJF2 1139 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 CLEC4EQ9ULY5 219 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 SNX11Q9Y5W9 270 aa20.86■□□□□ 0.93
CCDC40-206ENST00000572083 URB1O60287 2271 aaKnown RBP20.86■□□□□ 0.93
CCDC40-206ENST00000572083 HELZ2Q9BYK8 2649 aaKnown RBP20.85■□□□□ 0.93
CCDC40-206ENST00000572083 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.85■□□□□ 0.93
CCDC40-206ENST00000572083 CORO1AP31146 461 aaKnown RBP20.85■□□□□ 0.93
CCDC40-206ENST00000572083 ASPAP45381 313 aa20.85■□□□□ 0.93
CCDC40-206ENST00000572083 NASPP49321 788 aaPredicted RBP20.85■□□□□ 0.93
CCDC40-206ENST00000572083 AFF3P51826 1226 aaKnown RBP20.85■□□□□ 0.93
CCDC40-206ENST00000572083 DLG4P78352 724 aa20.85■□□□□ 0.93
CCDC40-206ENST00000572083 CLDN10P78369 228 aa20.85■□□□□ 0.93
CCDC40-206ENST00000572083 CAMK2BQ13554 666 aa20.85■□□□□ 0.93
CCDC40-206ENST00000572083 KNOP1Q1ED39 458 aaKnown RBP20.85■□□□□ 0.93
CCDC40-206ENST00000572083 KIF19Q2TAC6 998 aa20.85■□□□□ 0.93
CCDC40-206ENST00000572083 LAYNQ6UX15 382 aa20.85■□□□□ 0.93
CCDC40-206ENST00000572083 SCD5Q86SK9 330 aa20.85■□□□□ 0.93
CCDC40-206ENST00000572083 UNC93AQ86WB7 457 aa20.85■□□□□ 0.93
CCDC40-206ENST00000572083 ELOVL2Q9NXB9 296 aa20.85■□□□□ 0.93
CCDC40-206ENST00000572083 ZNF510Q9Y2H8 683 aa20.85■□□□□ 0.93
CCDC40-206ENST00000572083 KALRNO60229 2985 aa20.85■□□□□ 0.93
CCDC40-206ENST00000572083 HLA-EP13747 358 aa20.84■□□□□ 0.93
CCDC40-206ENST00000572083 CHKAP35790 457 aa20.84■□□□□ 0.93
CCDC40-206ENST00000572083 KIF11P52732 1056 aa20.84■□□□□ 0.93
CCDC40-206ENST00000572083 EFEMP1Q12805 493 aa20.84■□□□□ 0.93
CCDC40-206ENST00000572083 SUZ12Q15022 739 aaKnown RBP20.84■□□□□ 0.93
CCDC40-206ENST00000572083 SGSM1Q2NKQ1 1148 aa20.84■□□□□ 0.93
CCDC40-206ENST00000572083 TMEM215Q68D42 235 aa20.84■□□□□ 0.93
CCDC40-206ENST00000572083 SERPINA13PQ6UXR4 307 aa20.84■□□□□ 0.93
CCDC40-206ENST00000572083 TADA2BQ86TJ2 420 aa20.84■□□□□ 0.93
CCDC40-206ENST00000572083 LINC00301Q8NCQ3 95 aa20.84■□□□□ 0.93
CCDC40-206ENST00000572083 CYFIP2Q96F07 1278 aa20.84■□□□□ 0.93
CCDC40-206ENST00000572083 DCBLD2Q96PD2 775 aa20.84■□□□□ 0.93
CCDC40-206ENST00000572083 HNRNPABQ99729 332 aaKnown RBP20.84■□□□□ 0.93
CCDC40-206ENST00000572083 NUMA1Q14980 2115 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 A0A087WV48 116 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 KCNK3O14649 394 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 STX6O43752 255 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 KIF20AO95235 890 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 RALAP11233 206 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 ACSL1P33121 698 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 CCDC186Q7Z3E2 898 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 DENND1CQ8IV53 801 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 SCUBE3Q8IX30 993 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 IQUBQ8NA54 791 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 RBBP8NLQ8NC74 664 aaPredicted RBP20.83■□□□□ 0.93
CCDC40-206ENST00000572083 UPF2Q9HAU5 1272 aaKnown RBP20.83■□□□□ 0.93
CCDC40-206ENST00000572083 TM9SF3Q9HD45 589 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 PNPLA8Q9NP80 782 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 AGO1Q9UL18 857 aaKnown RBP20.83■□□□□ 0.93
CCDC40-206ENST00000572083 MTMR6Q9Y217 621 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 ANKRD6Q9Y2G4 727 aa20.83■□□□□ 0.93
CCDC40-206ENST00000572083 GOLGA4Q13439 2230 aaKnown RBP20.83■□□□□ 0.93
CCDC40-206ENST00000572083 SPTLC2O15270 562 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 TNFSF14O43557 240 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 ASS1P00966 412 aaKnown RBP20.82■□□□□ 0.92
CCDC40-206ENST00000572083 PRB1P04280 392 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 TRIM21P19474 475 aaKnown RBP20.82■□□□□ 0.92
CCDC40-206ENST00000572083 PIK3CAP42336 1068 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 GRK6P43250 576 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 PSEN1P49768 467 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 COG7P83436 770 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 IL9RQ01113 521 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 ARID5AQ03989 594 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 EIF4HQ15056 248 aaKnown RBP20.82■□□□□ 0.92
CCDC40-206ENST00000572083 TEAD4Q15561 434 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 ZACNQ401N2 412 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 DHRS13Q6UX07 377 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 ZNF366Q8N895 744 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 ADAM32Q8TC27 787 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 PCED1AQ9H1Q7 454 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 LHX5Q9H2C1 402 aa20.82■□□□□ 0.92
CCDC40-206ENST00000572083 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.82■□□□□ 0.92
CCDC40-206ENST00000572083 MUC22E2RYF6 1773 aaPredicted RBP20.82■□□□□ 0.92
CCDC40-206ENST00000572083 ASH1LQ9NR48 2969 aaKnown RBP20.82■□□□□ 0.92
CCDC40-206ENST00000572083 CYBBP04839 570 aa20.81■□□□□ 0.92
CCDC40-206ENST00000572083 CCT8P50990 548 aa20.81■□□□□ 0.92
CCDC40-206ENST00000572083 INCA1Q0VD86 236 aa20.81■□□□□ 0.92
CCDC40-206ENST00000572083 SMAD1Q15797 465 aaKnown RBP20.81■□□□□ 0.92
CCDC40-206ENST00000572083 PTPRNQ16849 979 aa20.81■□□□□ 0.92
CCDC40-206ENST00000572083 SHC4Q6S5L8 630 aa20.81■□□□□ 0.92
CCDC40-206ENST00000572083 PDCD7Q8N8D1 485 aaKnown RBP20.81■□□□□ 0.92
CCDC40-206ENST00000572083 OR2T3Q8NH03 318 aa20.81■□□□□ 0.92
CCDC40-206ENST00000572083 PIP4K2CQ8TBX8 421 aa20.81■□□□□ 0.92
CCDC40-206ENST00000572083 DDI1Q8WTU0 396 aa20.81■□□□□ 0.92
CCDC40-206ENST00000572083 TAF4BQ92750 862 aa20.81■□□□□ 0.92
CCDC40-206ENST00000572083 CDK5RAP1Q96SZ6 601 aaKnown RBP20.81■□□□□ 0.92
CCDC40-206ENST00000572083 NT5C1AQ9BXI3 368 aa20.81■□□□□ 0.92
CCDC40-206ENST00000572083 DCLK3Q9C098 648 aa20.81■□□□□ 0.92
CCDC40-206ENST00000572083 CLIC5Q9NZA1 410 aa20.81■□□□□ 0.92
CCDC40-206ENST00000572083 KNL1Q8NG31 2342 aa20.81■□□□□ 0.92
CCDC40-206ENST00000572083 FLNBO75369 2602 aaKnown RBP20.8■□□□□ 0.92
CCDC40-206ENST00000572083 HLA-DRAP01903 254 aa20.8■□□□□ 0.92
CCDC40-206ENST00000572083 RPN1P04843 607 aaKnown RBP20.8■□□□□ 0.92
CCDC40-206ENST00000572083 CD58P19256 250 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms