RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CYP4V2Q6ZWL3 525 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 MICALL1Q8N3F8 863 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 DEFB123Q8N688 67 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 SHKBP1Q8TBC3 707 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 TEKT4Q8WW24 435 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 TCEAL4Q96EI5 215 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 RBM41Q96IZ5 413 aaKnown RBP16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 PBKQ96KB5 322 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 GAS2L1Q99501 681 aaPredicted RBP16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 APOL5Q9BWW9 433 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 CARD9Q9H257 536 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 TMEM51Q9NW97 253 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 AP4E1Q9UPM8 1137 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 TLR6Q9Y2C9 796 aa16.02■□□□□ 0.16
HERPUD1-219ENST00000570273 LRRD1A4D1F6 860 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 PI4K2BG5E9Z4 385 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 CEP104O60308 925 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 APOEP02649 317 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 HMBSP08397 361 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 MBL2P11226 248 aaPredicted RBP16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 CCR1P32246 355 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 KPNA1P52294 538 aaPredicted RBP16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 KRT81Q14533 505 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 TEAD2Q15562 447 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 ARL13BQ3SXY8 428 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 BRMS1LQ5PSV4 323 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 ERMARDQ5T6L9 678 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 DCAF12L1Q5VU92 463 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 CCDC50Q8IVM0 306 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 EXD1Q8NHP7 514 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 COG1Q8WTW3 980 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 NTAN1Q96AB6 310 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 GUCD1Q96NT3 240 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 WDCPQ9H6R7 721 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 FZD10Q9ULW2 581 aa16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 HBS1LQ9Y450 684 aaKnown RBP16.02■□□□□ 0.15
HERPUD1-219ENST00000570273 TRAV19A0A0A6YYK7 116 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 NRG2O14511 850 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 ZNF197O14709 1029 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 ZRANB2O95218 330 aaKnown RBP eCLIP16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 PAPLNO95428 1278 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 MOCS2O96007 188 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 SLC2A3P11169 496 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 PRLRP16471 622 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 DDX6P26196 483 aaKnown RBP eCLIP16.01■□□□□ 0.154e-7■■■□□ 15.1
HERPUD1-219ENST00000570273 ADAM15Q13444 863 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 EIF4EBP2Q13542 120 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 PPP2R5DQ14738 602 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 CA9Q16790 459 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 SLC5A9Q2M3M2 681 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 STXBP5Q5T5C0 1151 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 GPR158Q5T848 1215 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 EP400NLQ6ZTU2 488 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 ARL14EPQ8N8R7 260 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 MAB21L3Q8N8X9 362 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 KCTD6Q8NC69 237 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 RNF25Q96BH1 459 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 CAPZA3Q96KX2 299 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 FCRL2Q96LA5 508 aaPredicted RBP16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 TKTL2Q9H0I9 626 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 DHX35Q9H5Z1 703 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 TMPRSS4Q9NRS4 437 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 CDC23Q9UJX2 597 aa16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 MRPS23Q9Y3D9 190 aaKnown RBP16.01■□□□□ 0.15
HERPUD1-219ENST00000570273 CES2O00748 559 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 ZNF185O15231 689 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 MOSPD3O75425 235 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 CKMP06732 381 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 IRF1P10914 325 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 PYGMP11217 842 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 HOXB8P17481 243 aaPredicted RBP16■□□□□ 0.15
HERPUD1-219ENST00000570273 CEBPBP17676 345 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 PFKLP17858 780 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 HDCP19113 662 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 POU3F3P20264 500 aaPredicted RBP16■□□□□ 0.15
HERPUD1-219ENST00000570273 ADRA1BP35368 520 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 CETN2P41208 172 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 AIF1P55008 147 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 CDH6P55285 790 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 SCAPQ12770 1279 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 PRSS36Q5K4E3 855 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 AADACL2Q6P093 401 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 PSTKQ8IV42 348 aaKnown RBP16■□□□□ 0.15
HERPUD1-219ENST00000570273 RCOR2Q8IZ40 523 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 ING5Q8WYH8 240 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 RAPGEF5Q92565 580 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 SLC39A13Q96H72 371 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 SLC22A12Q96S37 553 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 KCTD15Q96SI1 283 aaPredicted RBP16■□□□□ 0.15
HERPUD1-219ENST00000570273 RNF38Q9H0F5 515 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 SLITRK6Q9H5Y7 841 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16■□□□□ 0.15
HERPUD1-219ENST00000570273 SMPD4Q9NXE4 827 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 ARHGEF38Q9NXL2 777 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 CLDND1Q9NY35 253 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 MYO9BQ13459 2157 aa16■□□□□ 0.15
HERPUD1-219ENST00000570273 OLFM2O95897 454 aa15.99■□□□□ 0.15
HERPUD1-219ENST00000570273 IGLV3-27P01718 113 aa15.99■□□□□ 0.15
HERPUD1-219ENST00000570273 KDELR1P24390 212 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms