RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 BEND5Q7L4P6 421 aa17.86■□□□□ 0.45
MAP1LC3B-208ENST00000570189 DENND1CQ8IV53 801 aa17.86■□□□□ 0.45
MAP1LC3B-208ENST00000570189 FMNL3Q8IVF7 1028 aa17.86■□□□□ 0.45
MAP1LC3B-208ENST00000570189 C12orf50Q8NA57 414 aaPredicted RBP17.86■□□□□ 0.45
MAP1LC3B-208ENST00000570189 MLKLQ8NB16 471 aa17.86■□□□□ 0.45
MAP1LC3B-208ENST00000570189 UBA3Q8TBC4 463 aa17.86■□□□□ 0.45
MAP1LC3B-208ENST00000570189 PIWIL1Q96J94 861 aaKnown RBP17.86■□□□□ 0.45
MAP1LC3B-208ENST00000570189 MED15Q96RN5 788 aa17.86■□□□□ 0.45
MAP1LC3B-208ENST00000570189 INTS2Q9H0H0 1204 aaKnown RBP17.86■□□□□ 0.45
MAP1LC3B-208ENST00000570189 MUC22E2RYF6 1773 aaPredicted RBP17.86■□□□□ 0.45
MAP1LC3B-208ENST00000570189 NCOR2Q9Y618 2525 aa17.86■□□□□ 0.45
MAP1LC3B-208ENST00000570189 GDF9O60383 454 aa17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 CYBBP04839 570 aa17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 C7P10643 843 aa17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 PRKCSHP14314 528 aaPredicted RBP17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 GABRG2P18507 467 aa17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 GBP1P32455 592 aa17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 HARS2P49590 506 aaKnown RBP17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 RING1Q06587 406 aa17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 NNTQ13423 1086 aa17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 EIF4HQ15056 248 aaKnown RBP17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 AASDHQ4L235 1098 aaPredicted RBP17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 PEAR1Q5VY43 1037 aaPredicted RBP17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 SDE2Q6IQ49 451 aa17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 RRAGAQ7L523 313 aa17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 STK32AQ8WU08 396 aa17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 RNF139Q8WU17 664 aa17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 HMGB4Q8WW32 186 aa17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 AZIN2Q96A70 460 aa17.85■□□□□ 0.45
MAP1LC3B-208ENST00000570189 CNOT1A5YKK6 2376 aaKnown RBP17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 M0QYV0 167 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 SART1O43290 800 aaKnown RBP17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 ZNF217O75362 1048 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 CAVIN2O95810 425 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 BRD2P25440 801 aaKnown RBP17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 HOXD12P35452 270 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 GPD2P43304 727 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 MPPE1Q53F39 396 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 TRIM65Q6PJ69 517 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 CLEC17AQ6ZS10 378 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 ANKS1BQ7Z6G8 1248 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 METTL3Q86U44 580 aaKnown RBP17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 IRF2BP1Q8IU81 584 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 CHPFQ8IZ52 775 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 IPO4Q8TEX9 1081 aaKnown RBP17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 NDRG1Q92597 394 aaKnown RBP17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 ACOX2Q99424 681 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 ZDHHC4Q9NPG8 344 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 PLK2Q9NYY3 685 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 BCCIPQ9P287 314 aaKnown RBP eCLIP17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 THAP10Q9P2Z0 257 aaPredicted RBP17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 EVLQ9UI08 416 aaPredicted RBP17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 MBD1Q9UIS9 605 aaPredicted RBP17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 SPTBN2O15020 2390 aa17.84■□□□□ 0.45
MAP1LC3B-208ENST00000570189 LTFP02788 710 aa17.83■□□□□ 0.44
MAP1LC3B-208ENST00000570189 HMBSP08397 361 aa17.83■□□□□ 0.44
MAP1LC3B-208ENST00000570189 ACADSBP45954 432 aa17.83■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CREB5Q02930 508 aa17.83■□□□□ 0.44
MAP1LC3B-208ENST00000570189 MPP7Q5T2T1 576 aa17.83■□□□□ 0.44
MAP1LC3B-208ENST00000570189 ADGRF1Q5T601 910 aa17.83■□□□□ 0.44
MAP1LC3B-208ENST00000570189 SLC36A4Q6YBV0 504 aa17.83■□□□□ 0.44
MAP1LC3B-208ENST00000570189 LPCAT2Q7L5N7 544 aa17.83■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CALCOCO1Q9P1Z2 691 aa17.83■□□□□ 0.44
MAP1LC3B-208ENST00000570189 DCDC2BA2VCK2 349 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 MED7O43513 233 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 TIMM44O43615 452 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 LCP1P13796 627 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 HOXD9P28356 352 aaPredicted RBP17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CCDC6Q16204 474 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CAMK4Q16566 473 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 GEN1Q17RS7 908 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 STPG1Q5TH74 334 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 NUGGCQ68CJ6 796 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CYP2U1Q7Z449 544 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 KIAA0907Q7Z7F0 614 aaPredicted RBP17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 UNC45BQ8IWX7 931 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 UCMAQ8WVF2 138 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 EDEM1Q92611 657 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 TRIM62Q9BVG3 475 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 SLC4A5Q9BY07 1137 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 CLSTN2Q9H4D0 955 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 RXFP3Q9NSD7 469 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 SFMBT1Q9UHJ3 866 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 INVSQ9Y283 1065 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 GON4LQ3T8J9 2241 aa17.82■□□□□ 0.44
MAP1LC3B-208ENST00000570189 LNP1A1A4G5 178 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 ZBTB24O43167 697 aaPredicted RBP17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 IRAK2O43187 625 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 AP5Z1O43299 807 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 NDUFV2P19404 249 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 RGS7P49802 495 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 KIAA1211LQ6NV74 962 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 GBP6Q6ZN66 633 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 TMEM110Q86TL2 294 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 SYT12Q8IV01 421 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 ZNF557Q8N988 423 aaPredicted RBP17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 DDI1Q8WTU0 396 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 ZNF606Q8WXB4 792 aa17.81■□□□□ 0.44
MAP1LC3B-208ENST00000570189 RLN3Q8WXF3 142 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms