RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 SPECC1LQ69YQ0 1117 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 Q6ZNB5 142 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 SLC26A9Q7LBE3 791 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 IRF2BP2Q7Z5L9 587 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 UNC45BQ8IWX7 931 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 DTWD2Q8NBA8 298 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 SLC2A13Q96QE2 648 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDT1-203ENST00000569140 SELENOOQ9BVL4 669 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 OSBPL6Q9BZF3 934 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 NUCKS1Q9H1E3 243 aaKnown RBP13.34□□□□□ -0.27
CDT1-203ENST00000569140 PLK2Q9NYY3 685 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDT1-203ENST00000569140 RAPGEFL1Q9UHV5 662 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 STAP1Q9ULZ2 295 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 TLR6Q9Y2C9 796 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 ITIH6Q6UXX5 1313 aa13.34□□□□□ -0.27
CDT1-203ENST00000569140 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.33□□□□□ -0.28
CDT1-203ENST00000569140 M0QYT0 321 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 IRAK2O43187 625 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 GYPCP04921 128 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 APODP05090 189 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 CALB1P05937 261 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 UNGP13051 313 aaPredicted RBP13.33□□□□□ -0.28
CDT1-203ENST00000569140 OPRD1P41143 372 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 CENPCQ03188 943 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 TRIM14Q14142 442 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 DGKKQ5KSL6 1271 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 FSTL4Q6MZW2 842 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 BEND5Q7L4P6 421 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 TMC6Q7Z403 805 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 VPS36Q86VN1 386 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 C12orf40Q86WS4 652 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 DDI1Q8WTU0 396 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 FCRL2Q96LA5 508 aaPredicted RBP13.33□□□□□ -0.28
CDT1-203ENST00000569140 XPO6Q96QU8 1125 aaKnown RBP13.33□□□□□ -0.28
CDT1-203ENST00000569140 PNKPQ96T60 521 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 ARHGEF4Q9NR80 690 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 DNAJC17Q9NVM6 304 aaKnown RBP13.33□□□□□ -0.28
CDT1-203ENST00000569140 AIPL1Q9NZN9 384 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 WDR35Q9P2L0 1181 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 CAPN11Q9UMQ6 739 aa13.33□□□□□ -0.28
CDT1-203ENST00000569140 TYW5A2RUC4 315 aaKnown RBP13.32□□□□□ -0.28
CDT1-203ENST00000569140 HOXC11O43248 304 aaPredicted RBP13.32□□□□□ -0.28
CDT1-203ENST00000569140 GJB6O95452 261 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 CHRNB1P11230 501 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 DRD1P21728 446 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 MMP8P22894 467 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 NOS2P35228 1153 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 MATKP42679 507 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 MAGEA9P43362 315 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 NNTQ13423 1086 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 CDO1Q16878 200 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 ZC3H12AQ5D1E8 599 aaKnown RBP13.32□□□□□ -0.28
CDT1-203ENST00000569140 TMEM196Q5HYL7 178 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 GRAMD4Q6IC98 578 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 ACAD10Q6JQN1 1059 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 DNAJC24Q6P3W2 148 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 Q6ZS52 159 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 SND1Q7KZF4 910 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDT1-203ENST00000569140 ZNF571Q7Z3V5 609 aaPredicted RBP13.32□□□□□ -0.28
CDT1-203ENST00000569140 VSTM4Q8IW00 320 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 EMC1Q8N766 993 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 DDX50Q9BQ39 737 aaKnown RBP13.32□□□□□ -0.28
CDT1-203ENST00000569140 ANP32EQ9BTT0 268 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 FBRSL1Q9HCM7 1045 aaKnown RBP13.32□□□□□ -0.28
CDT1-203ENST00000569140 TAS2R14Q9NYV8 317 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 DEC1Q9P2X7 70 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 SLC12A6Q9UHW9 1150 aa13.32□□□□□ -0.28
CDT1-203ENST00000569140 TRIOO75962 3097 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 GOLGA6L7A0A1B0GV03 622 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 ANKRD62A6NC57 917 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 LAMTOR5O43504 91 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 GALR2O43603 387 aaPredicted RBP13.31□□□□□ -0.28
CDT1-203ENST00000569140 ACSL4O60488 711 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 RNF40O75150 1001 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 IGLV3-27P01718 113 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 SERPING1P05155 500 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 ABCB4P21439 1286 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 CCR1P32246 355 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 FLT3P36888 993 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 SCNN1AP37088 669 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 PRKCIP41743 596 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 DGKGP49619 791 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 ATP11AP98196 1134 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 DEUP1Q05D60 604 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 RING1Q06587 406 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 TSR1Q2NL82 804 aaKnown RBP13.31□□□□□ -0.28
CDT1-203ENST00000569140 GAB4Q2WGN9 574 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 ADGRF1Q5T601 910 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 RFWD3Q6PCD5 774 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 CHSY1Q86X52 802 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 GAS2L3Q86XJ1 694 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 DNAAF5Q86Y56 855 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 PHF13Q86YI8 300 aaPredicted RBP13.31□□□□□ -0.28
CDT1-203ENST00000569140 CPXM2Q8N436 756 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 ATP6V0D2Q8N8Y2 350 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 CFAP57Q96MR6 1250 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 TBCBQ99426 244 aa13.31□□□□□ -0.28
CDT1-203ENST00000569140 PRRX2Q99811 253 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms